Co-expression analysis

Gene ID TaAffx.22560.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g62640: proline-rich family protein (HF=2e-4)
Module size 6 genes
NF 0.07
%ile 18.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.86TaAffx.22560.1.S1_atCA656572--2e-4At5g62640proline-rich family proteinO.I.H.G.S.X.
0.4464.50.98Ta.359.3.S1_x_atCA685131--2e-1At3g28140calmodulin-binding proteinO.I.H.G.S.X.
0.4464.50.98Ta.359.1.S1_a_atBJ263340--3e-7At3g01150PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)O.I.H.G.S.X.
0.4464.50.99Ta.359.2.S1_x_atCD863544--3e-15At3g01150PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)O.I.H.G.S.X.
0.3142.70.95Ta.11642.1.S1_atBQ170513--1e+0Atmg00610-O.I.H.G.S.X.
0.023.60.91TaAffx.72723.1.S1_s_atBE427906--7e+0At5g56170-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.399.0GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
6.198.1GSM139917Anther leptotene-pachytene rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.897.9GSM139912Anther pre-meiosis rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.797.9GSM139920Anther diplotene-anaphaseI rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.297.5GSM139929Anther immature pollen rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.897.2GSM139918Anther leptotene-pachytene rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.496.8GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
4.496.8GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.396.7GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
4.296.6GSM139921Anther diplotene-anaphaseI rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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