Co-expression analysis

Gene ID TaAffx.21905.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g24503: ALDH2C4 (HF=4e-4)
Module size 6 genes
NF 0.71
%ile 93.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7790.80.90TaAffx.21905.1.S1_atCD871843--4e-4At3g24503ALDH2C4O.I.H.G.S.X.
0.7790.80.90TaAffx.21905.1.S1_x_atCD871843--4e-4At3g24503ALDH2C4O.I.H.G.S.X.
0.6786.30.90Ta.16183.1.S1_atCA602110--4e+0At1g05420OFP12 (OVATE FAMILY PROTEIN 12)O.I.H.G.S.X.
0.6182.00.90Ta.5805.3.S1_a_atCD871842--4e-7At3g24503ALDH2C4O.I.H.G.S.X.
0.5576.80.92Ta.5805.2.S1_atCA597583--3e-14At3g24503ALDH2C4O.I.H.G.S.X.
0.5072.40.91Ta.19411.1.S1_atCD881454--1e+0At4g32780phosphoinositide bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
69.8100.0GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
56.699.9GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
19.399.7GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
13.299.5GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
13.299.5GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
12.999.4GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
11.399.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.798.7GSM143506Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.996.1GSM250912TcLr34_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.695.6GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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