Co-expression analysis

Gene ID	TaAffx.19604.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g47090: unknown protein (HF=3e-1)
Module size	7 genes
NF	0.15
%ile	28.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.0	0.95	TaAffx.19604.1.A1_at	BJ309279	-	-	3e-1	At5g47090	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.95	Ta.30888.1.S1_at	CN011455	-	-	1e+0	At1g05920	DNA binding	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.96	Ta.22398.1.S1_at	CA597140	-	-	8e+0	At5g20100	unknown protein	O.I.	H.G.	S.X.	Please select
0.13	14.6	0.95	TaAffx.72097.1.S1_at	BJ260927	-	-	8e+0	At5g41450	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.10	11.3	0.95	Ta.2818.1.S1_x_at	BJ319737	-	-	6e-1	At1g53260	unknown protein	O.I.	H.G.	S.X.	Please select
0.10	11.3	0.95	TaAffx.11289.1.S1_at	CA631316	-	-	3e+0	At5g38310	unknown protein	O.I.	H.G.	S.X.	Please select
0.08	9.4	0.95	Ta.10642.1.S1_at	CA612878	-	-	1e+0	At4g17900	zinc-binding family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.6	98.9	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
7.8	98.7	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
6.1	98.1	GSM298084	Crown tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.9	98.0	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.8	97.9	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.1	97.5	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.0	97.4	GSM298085	Crown tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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