Co-expression analysis

Gene ID	TaAffx.1833.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g37409: unknown protein (HF=5e-1)
Module size	9 genes
NF	0.26
%ile	42.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.78	91.1	0.95	TaAffx.1833.1.S1_at	BJ239476	-	-	5e-1	At4g37409	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.96	Ta.7373.1.S1_at	CK197072	-	-	2e-1	At3g08640	alphavirus core protein family	O.I.	H.G.	S.X.	Please select
0.26	33.6	0.95	TaAffx.83970.1.S1_at	CA647111	-	-	7e-2	At3g10525	-	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.95	Ta.1074.1.S1_x_at	BE516304	-	-	5e-1	At2g04340	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.95	TaAffx.31511.1.S1_at	BJ284978	-	-	2e-6	At2g42670	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.96	TaAffx.6430.1.S1_at	CA686025	-	-	3e-4	At3g04460	PEX12	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.97	Ta.4372.1.A1_at	BJ250463	-	-	7e+0	At5g05100	nucleic acid binding	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.97	Ta.1705.3.S1_a_at	CA729787	-	-	4e-3	At3g48870	HSP93-III	O.I.	H.G.	S.X.	Please select
0.14	15.8	0.95	Ta.5602.1.A1_at	BJ286052	-	-	5e+0	At3g02480	ABA-responsive protein-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.6	97.0	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.6	97.0	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
4.5	96.9	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.2	94.8	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
3.0	94.3	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
2.7	93.3	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.6	92.9	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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