Co-expression analysis

Gene ID	TaAffx.16192.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g43160: RAP2.6 (related to AP2 6) (HF=1e-8)
Module size	6 genes
NF	0.09
%ile	20.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.36	51.9	0.74	TaAffx.16192.1.S1_at	BQ169008	-	-	1e-8	At1g43160	RAP2.6 (related to AP2 6)	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.82	TaAffx.102572.1.S1_at	CA593369	-	-	1e+0	At1g03022	unknown protein	O.I.	H.G.	S.X.	Please select
0.08	9.4	0.77	Ta.8448.1.A1_at	BQ161910	-	-	4e+0	At3g10525	-	O.I.	H.G.	S.X.	Please select
0.08	9.4	0.76	Ta.13567.1.S1_at	BQ166291	-	-	2e-3	At2g23580	MES4 (METHYL ESTERASE 4)	O.I.	H.G.	S.X.	Please select
0.06	7.6	0.82	Ta.28040.1.A1_at	BF474041	-	-	2e+0	At1g26600	CLE9 (CLAVATA3/ESR-RELATED 9)	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.78	TaAffx.130164.1.S1_at	CK163753	-	-	5e+0	At5g17190	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.9	99.4	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
6.4	98.2	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.2	97.5	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.2	97.5	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.7	97.1	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.7	93.3	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.7	93.3	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.6	92.9	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.6	92.9	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.4	92.0	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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