Co-expression analysis

Gene ID	TaAffx.16068.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g33260: protein kinase family protein (HF=1e+0)
Module size	6 genes
NF	0.68
%ile	91.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.95	TaAffx.16068.1.S1_at	BQ168935	-	-	1e+0	At1g33260	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.96	Ta.6965.1.S1_at	BJ313225	-	-	3e+0	At3g03847	auxin-responsive family protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.95	TaAffx.91428.1.S1_at	BJ313181	-	-	3e+0	At4g21450	vesicle-associated membrane family protein / VAMP family protein	O.I.	H.G.	S.X.	Please select
0.56	78.6	0.93	Ta.30534.1.S1_at	BJ287888	-	-	2e+0	At2g20830	folic acid binding / transferase	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.93	Ta.23990.1.A1_at	CA722311	-	-	4e+0	At3g11020	DREB2B (DRE/CRT-BINDING PROTEIN 2B)	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.95	Ta.14323.1.S1_at	BU100287	-	-	1e+1	At4g18593	dual specificity protein phosphatase-related	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.4	99.5	GSM143505	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
13.3	99.5	GSM143507	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
9.5	99.1	GSM315202	target strand labeled: Sense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
6.2	98.1	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.8	97.9	GSM143506	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.4	97.7	GSM250914	Tc_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.4	97.7	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.3	97.6	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.0	97.4	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.7	97.1	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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