Co-expression analysis

Gene ID TaAffx.16042.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g35375: unknown protein (HF=1e+1)
Module size 10 genes
NF 0.04
%ile 13.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.10.86TaAffx.16042.1.S1_atBQ482892--1e+1At5g35375unknown proteinO.I.H.G.S.X.
0.3346.90.93Ta.11056.1.A1_atBQ168456--2e+0At4g36680pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.2125.50.93TaAffx.105114.1.S1_atCA738984--4e+0At5g38197-O.I.H.G.S.X.
0.1415.80.92Ta.26225.1.A1_atCD452978--1e-1At3g53880aldo/keto reductase family proteinO.I.H.G.S.X.
0.1415.80.92Ta.23503.1.A1_atBJ311120--2e+0At1g48605ATHAL3BO.I.H.G.S.X.
0.1011.30.92Ta.10269.3.S1_atBJ236928--2e-1At1g22280protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.045.80.94Ta.5963.1.A1_atBJ299461--5e+0At4g00840zinc ion bindingO.I.H.G.S.X.
0.034.70.93TaAffx.92283.1.A1_atBJ272330--3e+0At3g16280DNA binding / transcription factorO.I.H.G.S.X.
0.023.60.93Ta.3543.2.S1_atBJ243568--6e-1At2g37610unknown proteinO.I.H.G.S.X.
0.012.40.92Ta.12315.2.S1_a_atBQ172080--4e-1At3g61260DNA-binding family protein / remorin family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.596.9GSM298091Leaf tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.596.9GSM298094Crown tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.596.9GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.496.8GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.096.3GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.495.2GSM298088Crown tissue of Solstice at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.495.2GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.294.8GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.194.5GSM298087Crown tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.194.5GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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