Co-expression analysis

Gene ID TaAffx.15847.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g57550: XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3) (HF=1e-3)
Module size 6 genes
NF 0.38
%ile 61.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7790.80.90TaAffx.15847.2.S1_atCA721853--1e-3At5g57550XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)O.I.H.G.S.X.
0.5779.20.90Ta.9906.1.A1_atBJ239828--6e+0At5g47720acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putativeO.I.H.G.S.X.
0.4058.40.92Ta.9906.3.A1_a_atCA736405--3e+0At1g50940ETFALPHA (electron transfer flavoprotein alpha)O.I.H.G.S.X.
0.3651.90.90Ta.29462.1.A1_atCK214572--2e+0At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)O.I.H.G.S.X.
0.2939.20.90Ta.21533.1.A1_atCA628906--4e+0At5g02890transferase family proteinO.I.H.G.S.X.
0.2125.50.90TaAffx.73027.1.A1_atBE516792--2e-1At1g76920F-box family protein (FBX3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.599.5GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
13.499.5GSM138169genotype B68 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
11.999.4GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
11.799.3GSM343678Wheat var. Kennedy_control_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
10.499.2GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
10.099.1GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
9.199.0GSM138161genotype A91 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
8.999.0GSM138215genotype A77 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
8.498.9GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.498.6GSM343686Wheat var. Kennedy_Fp inoculated_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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