Co-expression analysis

Gene ID TaAffx.141492.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g67350: unknown protein (HF=3e+0)
Module size 9 genes
NF 0.54
%ile 80.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5475.50.80TaAffx.141492.1.S1_atCA633696--3e+0At5g67350unknown proteinO.I.H.G.S.X.
0.6786.30.91Ta.5339.1.S1_atCA686067--1e-4At4g13400unknown proteinO.I.H.G.S.X.
0.5979.80.91Ta.21613.1.S1_atCA697121--7e+0At3g1095060S ribosomal protein L37a (RPL37aB)O.I.H.G.S.X.
0.5374.90.91Ta.15042.1.A1_atCA664508--1e-6At1g07040unknown proteinO.I.H.G.S.X.
0.5374.90.91Ta.2107.3.S1_atCA662251--1e-3At1g54100ALDH7B4 (Aldehyde Dehydrogenase 7B4)O.I.H.G.S.X.
0.5072.40.91Ta.28040.1.A1_atBF474041--2e+0At1g26600CLE9 (CLAVATA3/ESR-RELATED 9)O.I.H.G.S.X.
0.5072.40.92Ta.12337.1.S1_atCA638052--5e-15At5g46180delta-OATO.I.H.G.S.X.
0.3651.90.87TaAffx.82806.1.S1_atCA666816--2e-6At2g26910PDR4 (PLEIOTROPIC DRUG RESISTANCE 4)O.I.H.G.S.X.
0.3142.70.91Ta.28799.3.S1_x_atCA656288--1e+1At4g22750zinc finger (DHHC type) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.599.2GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.198.1GSM143506Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
4.897.2GSM143505Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
4.897.2GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.697.0GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.596.9GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.596.9GSM143507Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.094.3GSM143515Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
2.994.0GSM143520Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
2.994.0GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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