Co-expression analysis

Gene ID	TaAffx.13383.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At1g17800: plastocyanin-like domain-containing protein (HF=8e-1)
Module size	6 genes
NF	0.55
%ile	81.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	79.2	0.97	TaAffx.13383.1.A1_at	BG904557	-	-	8e-1	At1g17800	plastocyanin-like domain-containing protein	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.96	Ta.9217.1.S1_at	BT009612.1	-	-	1e-1	At2g22490	CYCD2	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.5909.3.A1_x_at	BJ298528	-	-	7e+0	At4g27350	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	TaAffx.76554.1.A1_at	BJ307578	-	-	1e+0	At5g54320	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.97	Ta.7363.1.A1_at	BJ276427	-	-	2e+0	At5g61090	nucleic acid binding	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.97	Ta.7428.2.A1_a_at	CA736575	-	-	2e+0	At3g04780	-	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.5	98.3	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.1	97.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.8	97.2	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.8	97.2	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.5	96.9	GSM298083	Crown tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.1	96.4	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.0	96.3	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.0	96.3	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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