Co-expression analysis

Gene ID	TaAffx.133762.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At4g34770: auxin-responsive family protein (HF=1e+0)
Module size	7 genes
NF	0.27
%ile	43.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.48	69.0	0.93	TaAffx.133762.1.A1_at	BJ306104	-	-	1e+0	At4g34770	auxin-responsive family protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.95	Ta.4052.1.A1_a_at	BJ263212	-	-	2e+0	At1g57610	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.95	Ta.4052.2.A1_a_at	BJ213636	-	-	1e+0	At1g57610	unknown protein	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.95	Ta.8872.1.S1_at	BQ162544	-	-	5e+0	At3g14760	unknown protein	O.I.	H.G.	S.X.	Please select
0.28	39.2	0.95	Ta.484.1.S1_at	BJ322416	-	-	3e+0	At5g54150	unknown protein	O.I.	H.G.	S.X.	Please select
0.16	18.2	0.95	Ta.11620.1.S1_at	BQ170468	-	-	6e+0	At2g45150	phosphatidate cytidylyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.94	Ta.4690.1.S1_at	CD907632	-	-	1e+0	At3g60290	oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
28.2	99.8	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
20.9	99.7	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
18.2	99.7	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
17.1	99.6	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
15.3	99.6	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
12.5	99.4	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.0	89.7	GSM324492	Si+ B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
1.9	88.9	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
1.8	88.1	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
1.8	88.1	GSM324490	Si+ B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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