Co-expression analysis

Gene ID TaAffx.13285.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g62210: embryo-specific protein-related (HF=3e+0)
Module size 27 genes
NF 0.36
%ile 58.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8593.80.91TaAffx.13285.1.S1_atBG910034--3e+0At5g62210embryo-specific protein-relatedO.I.H.G.S.X.
0.5475.50.94TaAffx.64591.1.S1_atBJ288225--1e+0At1g19010unknown proteinO.I.H.G.S.X.
0.5173.00.93Ta.19063.1.S1_atCA646746--4e+0At5g23290PDF5 (PREFOLDIN 5)O.I.H.G.S.X.
0.4969.70.93TaAffx.29653.1.S1_atCA637989--1e+1At5g65230AtMYB53 (myb domain protein 53)O.I.H.G.S.X.
0.4565.20.93TaAffx.112205.1.S1_atCA626060--4e+0At2g3616040S ribosomal protein S14 (RPS14A)O.I.H.G.S.X.
0.4565.20.93TaAffx.59306.1.S1_atCA603735--1e+0At4g22570APT3 (ADENINE PHOSPHORIBOSYL TRANSFERASE 3)O.I.H.G.S.X.
0.4464.50.93TaAffx.78717.1.S1_atCA728365--3e+0At2g24570WRKY17O.I.H.G.S.X.
0.4464.50.93TaAffx.120295.1.S1_atBJ232977--2e+1At5g42504unknown proteinO.I.H.G.S.X.
0.4464.50.93TaAffx.129082.2.S1_atCA610797--4e-3At1g58280-O.I.H.G.S.X.
0.4464.50.93TaAffx.30726.1.S1_atCA622623--1e+1At5g20500glutaredoxin, putativeO.I.H.G.S.X.
0.4260.90.94Ta.18034.1.S1_atCA627515--1e-2At5g62900unknown proteinO.I.H.G.S.X.
0.3651.90.93TaAffx.112465.1.S1_s_atCA623726--3e-13At4g00360CYP86A2 (CYTOCHROME P450 86 A2)O.I.H.G.S.X.
0.3651.90.95TaAffx.56155.1.S1_atCA656564--1e+1At5g26070hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.3651.90.93Ta.10689.2.S1_x_atCA622635--4e+0At1g21323unknown proteinO.I.H.G.S.X.
0.3549.80.93Ta.14146.3.S1_x_atCA697368--2e+1At5g24313unknown proteinO.I.H.G.S.X.
0.3244.40.95TaAffx.30598.1.S1_atCA623743--1e+0At3g05230signal peptidase subunit family proteinO.I.H.G.S.X.
0.3142.70.94TaAffx.51397.1.S1_atCA725473--4e-49At1g23490ATARF1 (ADP-RIBOSYLATION FACTOR 1)O.I.H.G.S.X.
0.3142.70.94TaAffx.29371.1.S1_atCA644147--4e+0At5g18310unknown proteinO.I.H.G.S.X.
0.3040.90.95TaAffx.112158.1.S1_atCA626538--2e+1At3g28590unknown proteinO.I.H.G.S.X.
0.2839.20.95Ta.9084.3.S1_atCA666296--1e+1At5g50050invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.2839.20.94TaAffx.112158.1.S1_x_atCA626538--2e+1At3g28590unknown proteinO.I.H.G.S.X.
0.2735.60.93TaAffx.38268.1.A1_atBJ242361--1e+0At1g21326VQ motif-containing proteinO.I.H.G.S.X.
0.2633.60.95Ta.3203.2.S1_x_atCA621738--5e-6At1g27530-O.I.H.G.S.X.
0.2532.10.96Ta.3911.2.S1_s_atCA604151--4e+0At2g44290protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3)O.I.H.G.S.X.
0.2329.00.94TaAffx.50210.1.S1_atCA744417--7e-2At1g60880AGL56O.I.H.G.S.X.
0.2024.00.95TaAffx.3664.1.S1_atCD876496--2e+0At2g47710universal stress protein (USP) family proteinO.I.H.G.S.X.
0.1719.80.94TaAffx.110167.1.S1_atCA662870--4e+0At4g14440HCD1 (3-HYDROXYACYL-COA DEHYDRATASE 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.599.1GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
8.598.9GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.398.2GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.298.1GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
5.897.9GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.097.4GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.797.1GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.596.9GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.196.4GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.096.3GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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