Co-expression analysis

Gene ID	TaAffx.132315.2.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At5g59690: histone H4 (HF=3e-22)
Module size	6 genes
NF	0.19
%ile	33.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	79.8	0.91	TaAffx.132315.2.S1_x_at	BE493709	-	-	3e-22	At5g59690	histone H4	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.93	TaAffx.132315.2.S1_at	BE493709	-	-	3e-22	At5g59690	histone H4	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.95	TaAffx.59597.1.S1_at	CA598223	-	-	4e+0	At1g68430	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.95	TaAffx.111548.1.S1_at	CA638087	-	-	2e-1	At1g07750	cupin family protein	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.95	TaAffx.51774.1.S1_at	CA719107	-	-	2e-5	At5g20160	ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	O.I.	H.G.	S.X.	Please select
0.06	7.6	0.93	TaAffx.113263.11.S1_at	CA601426	-	-	5e-6	At5g65360	histone H3	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.0	98.0	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.0	98.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.9	98.0	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.8	97.9	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.8	97.9	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.8	97.9	GSM298063	Crown tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.4	97.7	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM298074	Crown tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.0	97.4	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM298085	Crown tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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