Co-expression analysis

Gene ID	TaAffx.132270.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g66260: auxin-responsive protein, putative (HF=1e+0)
Module size	6 genes
NF	0.48
%ile	74.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.46	66.8	0.83	TaAffx.132270.1.A1_at	CK211144	-	-	1e+0	At5g66260	auxin-responsive protein, putative	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.86	Ta.20218.1.A1_x_at	CA676243	-	-	1e+1	At3g04450	transcription factor	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.96	TaAffx.79227.1.S1_x_at	CA719459	-	-	2e+1	At5g59850	40S ribosomal protein S15A (RPS15aF)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.21394.1.S1_at	BJ215681	-	-	2e+0	At1g30016	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	TaAffx.79227.1.S1_at	CA719459	-	-	2e+1	At5g59850	40S ribosomal protein S15A (RPS15aF)	O.I.	H.G.	S.X.	Please select
0.13	14.6	0.87	Ta.21392.1.A1_at	CA676525	-	-	4e+0	At1g23960	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
45.3	99.9	GSM314251	tissue type: germinating seed, coleoptile - rep1	GSE12508	Transcription patterns during wheat development
35.0	99.9	GSM314253	tissue type: germinating seed, coleoptile - rep3	GSE12508	Transcription patterns during wheat development
32.8	99.9	GSM314252	tissue type: germinating seed, coleoptile - rep2	GSE12508	Transcription patterns during wheat development
6.2	98.1	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.9	98.0	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development
5.7	97.9	GSM314263	tissue type: seedling, crown - rep1	GSE12508	Transcription patterns during wheat development
5.4	97.7	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development
5.0	97.4	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.5	96.9	GSM314264	tissue type: seedling, crown - rep2	GSE12508	Transcription patterns during wheat development
4.5	96.9	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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