Co-expression analysis

Gene ID TaAffx.132143.3.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g42850: CYP718 (HF=1e+0)
Module size 6 genes
NF 0.08
%ile 19.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.77TaAffx.132143.3.S1_atCA696426--1e+0At2g42850CYP718O.I.H.G.S.X.
0.2939.20.93TaAffx.108746.1.S1_atCA684620--1e+0At5g46760basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.1314.60.92TaAffx.52516.1.S1_atCA706161--1e+1At5g41400zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.078.60.94TaAffx.64591.1.S1_atBJ288225--1e+0At1g19010unknown proteinO.I.H.G.S.X.
0.078.60.87TaAffx.79639.1.S1_atCA711551--4e+0At1g17970zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.023.60.93TaAffx.34241.2.S1_atCA722326--4e+0At5g51960-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.799.1GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
9.599.1GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.698.7GSM143506Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
7.698.7GSM143505Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
7.298.5GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.198.5GSM298081Leaf tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.998.4GSM298082Leaf tissue of Solstice at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.998.0GSM143507Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
5.697.8GSM298083Crown tissue of Solstice at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.497.7GSM298059Crown tissue of Harnesk at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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