Co-expression analysis

Gene ID	TaAffx.131315.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g09810: transporter-related (HF=2e-5)
Module size	6 genes
NF	0.50
%ile	76.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.95	TaAffx.131315.1.S1_at	BJ278064	-	-	2e-5	At4g09810	transporter-related	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.95	TaAffx.111296.1.S1_x_at	CA644002	-	-	9e-1	At2g01060	myb family transcription factor	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.95	TaAffx.31313.1.S1_at	CA617546	-	-	1e+1	At3g52561	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.96	Ta.2937.3.S1_x_at	BJ207642	-	-	1e+0	At5g42330	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.95	Ta.7714.3.S1_x_at	CA638977	-	-	1e+0	At1g16700	NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial, putative	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.95	TaAffx.31914.1.S1_at	CA605344	-	-	6e+0	At2g42900	-	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.6	99.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.6	98.3	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.9	98.0	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.5	97.8	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.2	97.5	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.8	97.2	GSM298057	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.0	96.3	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.8	96.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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