Co-expression analysis

Gene ID	TaAffx.129191.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g10070: ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2) (HF=3e-5)
Module size	6 genes
NF	0.46
%ile	72.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.96	TaAffx.129191.1.S1_at	CD906345	-	-	3e-5	At1g10070	ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.96	TaAffx.106044.1.S1_s_at	CA725446	-	-	2e+0	Atmg00550	-	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.3775.1.S1_at	BJ247563	-	-	8e-6	At4g38470	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.96	TaAffx.113977.1.S1_s_at	CA730611	-	-	5e+0	At4g32110	transferase, transferring glycosyl groups	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.96	Ta.1819.2.S1_a_at	CK163608	-	-	4e-78	At1g20260	hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanism	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.96	Ta.22868.2.S1_x_at	CA609685	-	-	9e-20	At5g59160	TOPP2	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.6	98.7	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.9	98.4	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.6	97.0	GSM298077	Leaf tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.4	96.8	GSM298078	Leaf tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.6	95.6	GSM298057	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.4	95.2	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.2	94.8	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.2	94.8	GSM298058	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.9	94.0	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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