Co-expression analysis

Gene ID	TaAffx.128848.3.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g08600: unknown protein (HF=4e+0)
Module size	6 genes
NF	0.23
%ile	38.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.89	TaAffx.128848.3.S1_at	CA649248	-	-	4e+0	At3g08600	unknown protein	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.87	TaAffx.128848.3.S1_s_at	CA649248	-	-	4e+0	At3g08600	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.86	TaAffx.128848.1.S1_at	CD871122	-	-	2e+0	At1g75220	integral membrane protein, putative	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.90	Ta.18768.2.S1_at	CA636388	-	-	3e+0	At5g05930	guanylyl cyclase-related (GC1)	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.91	Ta.5247.1.A1_at	CA709980	-	-	5e+0	At2g19045	RALFL13 (RALF-LIKE 13)	O.I.	H.G.	S.X.	Please select
0.07	8.6	0.90	Ta.7354.1.S1_at	CK215574	-	-	6e-1	At3g19200	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.2	99.0	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.0	98.8	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.2	98.5	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
6.2	98.1	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
5.8	97.9	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.4	97.7	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
5.2	97.5	GSM139919	Anther diplotene-anaphaseI rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.5	96.9	GSM139916	Anther leptotene-pachytene rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.4	96.8	GSM139929	Anther immature pollen rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.7	95.8	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Inter-species module comparison

A co-expression module including the maize gene, Zm.18248.1.A1_at, orthologous to the query gene, TaAffx.128848.3.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.48	61.3	Zm.18248.1.A1_at	At3g08600	solute carrier family 2, facilitated glucose transporter member 8	-	1e-1	At3g05160	sugar transporter, putative	O.I.	H.G.	S.X.	Please select
0.44	55.7	Zm.3359.1.A1_at	At3g08600	Hypothetical protein LOC100194208	-	2e+0	At4g00280	-	O.I.	H.G.	S.X.	Please select
0.43	52.8	Zm.19147.2.A1_at	At3g08600	-	-	2e+0	At1g59833	-	O.I.	H.G.	S.X.	Please select
0.33	36.0	Zm.8529.1.A1_at	At3g08600	hypothetical protein LOC100191333	-	3e-2	At1g33270	patatin-related	O.I.	H.G.	S.X.	Please select
0.27	24.6	Zm.7768.1.A1_s_at	At3g08600	hypothetical protein LOC100276601	-	4e-3	At5g23950	C2 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.14	7.7	Zm.6698.1.A1_at	At3g08600	periodic tryptophan protein 1	-	5e+0	At5g13890	unknown protein	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

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