Co-expression analysis

Gene ID TaAffx.128848.3.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g08600: unknown protein (HF=4e+0)
Module size 6 genes
NF 0.23
%ile 38.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.89TaAffx.128848.3.S1_atCA649248--4e+0At3g08600unknown proteinO.I.H.G.S.X.
0.8393.40.87TaAffx.128848.3.S1_s_atCA649248--4e+0At3g08600unknown proteinO.I.H.G.S.X.
0.6786.30.86TaAffx.128848.1.S1_atCD871122--2e+0At1g75220integral membrane protein, putativeO.I.H.G.S.X.
0.3244.40.90Ta.18768.2.S1_atCA636388--3e+0At5g05930guanylyl cyclase-related (GC1)O.I.H.G.S.X.
0.1213.30.91Ta.5247.1.A1_atCA709980--5e+0At2g19045RALFL13 (RALF-LIKE 13)O.I.H.G.S.X.
0.078.60.90Ta.7354.1.S1_atCK215574--6e-1At3g19200unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.299.0GSM139920Anther diplotene-anaphaseI rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
8.098.8GSM139921Anther diplotene-anaphaseI rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
7.298.5GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
6.298.1GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.897.9GSM139917Anther leptotene-pachytene rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.497.7GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.297.5GSM139919Anther diplotene-anaphaseI rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.596.9GSM139916Anther leptotene-pachytene rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.496.8GSM139929Anther immature pollen rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.795.8GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1620830_at, orthologous to the query gene, TaAffx.128848.3.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9599.61620830_atAt3g08600hypothetical protein LOC100247627-1e+1At5g39330unknown proteinO.I.H.G.S.X.
0.4868.81614298_atAt3g08600hypothetical protein LOC100256505-7e-40At1g08465YAB2 (YABBY2)O.I.H.G.S.X.
0.3853.61620204_atAt3g08600--8e-1At1g20070unknown proteinO.I.H.G.S.X.
0.3853.61612893_atAt3g08600hypothetical protein LOC100243553-2e-18At4g02510TOC159 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 159)O.I.H.G.S.X.
0.3751.71609523_atAt3g08600hypothetical protein LOC100250310-7e-2At2g28020-O.I.H.G.S.X.
0.3548.51613390_atAt3g08600hypothetical protein LOC100255619-5e-39At3g19170ATPREP1 (PRESEQUENCE PROTEASE 1)O.I.H.G.S.X.
0.3446.81614257_atAt3g08600hypothetical protein LOC100250970-4e-1At2g21660CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)O.I.H.G.S.X.
0.3345.71610491_atAt3g08600hypothetical protein LOC100247772-3e-20At3g07670SET domain-containing proteinO.I.H.G.S.X.
0.3243.11617079_atAt3g08600--4e-1At3g26900shikimate kinase family proteinO.I.H.G.S.X.
0.3039.41610508_atAt3g08600hypothetical protein LOC100253402-1e-9At3g44620protein tyrosine phosphataseO.I.H.G.S.X.
0.3039.41617962_atAt3g08600hypothetical protein LOC100250100-1e-10At1g60010unknown proteinO.I.H.G.S.X.
0.2837.71607285_s_atAt3g08600hypothetical protein LOC100262997-3e-54At5g52520OVA6 (OVULE ABORTION 6)O.I.H.G.S.X.
0.2632.01618995_atAt3g08600hypothetical protein LOC100261804-2e-6At4g25370Clp amino terminal domain-containing proteinO.I.H.G.S.X.
0.2632.01618219_atAt3g08600hypothetical protein LOC100267536-3e-10At2g45190AFO (ABNORMAL FLORAL ORGANS)O.I.H.G.S.X.
0.2530.51616672_atAt3g08600hypothetical protein LOC100252527-2e-2At3g24590PLSP1 (plastidic type I signal peptidase 1)O.I.H.G.S.X.
0.2327.51607003_atAt3g08600--4e+0At3g47650bundle-sheath defective protein 2 family / bsd2 familyO.I.H.G.S.X.
0.2225.61610345_atAt3g08600hypothetical protein LOC100266550-1e-1At3g30845unknown proteinO.I.H.G.S.X.
0.2225.61615571_atAt3g08600hypothetical protein LOC100250417-1e-24At5g24300SSI1 (SUPPRESSOR OF SALICYLIC ACID INSENSITIVITY 1)O.I.H.G.S.X.
0.2225.61607640_atAt3g08600hypothetical protein LOC100249595-1e-19At1g65260PTAC4 (PLASTID TRANSCRIPTIONALLY ACTIVE4)O.I.H.G.S.X.
0.2022.41607526_atAt3g08600hypothetical protein LOC100254959-3e-1At5g26200mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.1414.41620439_atAt3g08600hypothetical protein LOC100242621-1e+0At5g08320unknown proteinO.I.H.G.S.X.
0.1414.41620553_atAt3g08600hypothetical protein LOC100265994-4e-28At3g58140phenylalanyl-tRNA synthetase class IIc family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Zea_mays



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