Co-expression analysis

Gene ID	TaAffx.128565.28.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At5g37740: C2 domain-containing protein (HF=1e+1)
Module size	6 genes
NF	0.20
%ile	34.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.88	TaAffx.128565.28.S1_x_at	CA735092	-	-	1e+1	At5g37740	C2 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.91	TaAffx.57448.1.S1_at	CA629019	-	-	4e+0	At5g25080	-	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.91	TaAffx.57448.1.S1_x_at	CA629019	-	-	4e+0	At5g25080	-	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.92	TaAffx.128414.152.S1_at	CA671958	-	-	7e-2	Atcg00490	-	O.I.	H.G.	S.X.	Please select
0.18	21.0	0.91	Ta.28352.1.A1_at	CA722746	-	-	9e-23	At2g34420	LHB1B2	O.I.	H.G.	S.X.	Please select
0.06	7.6	0.91	TaAffx.25660.1.S1_at	CA697342	-	-	3e-1	At2g34430	LHB1B1	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.4	98.9	GSM298077	Leaf tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
8.0	98.8	GSM343686	Wheat var. Kennedy_Fp inoculated_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
7.0	98.5	GSM246397	SB57_Stem_ rep2_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
6.4	98.2	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.3	98.2	GSM314266	tissue type: seedling, leaf - rep1	GSE12508	Transcription patterns during wheat development
6.0	98.0	GSM314267	tissue type: seedling, leaf - rep2	GSE12508	Transcription patterns during wheat development
5.4	97.7	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.3	97.6	GSM298053	Leaf tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.2	97.5	GSM314268	tissue type: seedling, leaf - rep3	GSE12508	Transcription patterns during wheat development
5.0	97.4	GSM246394	SB69_Stem_ rep1_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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