Co-expression analysis

Gene ID	TaAffx.128418.127.A1_x_at
Gene name
Homology with Arabidopsis	Similar to At2g15830: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.43
%ile	68.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.0	0.95	TaAffx.128418.127.A1_x_at	CA730835	-	-	1e+0	At2g15830	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.94	TaAffx.43432.1.S1_at	CA612748	-	-	9e+0	At5g30495	-	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.94	TaAffx.110263.1.S1_at	CA661150	-	-	1e+0	At2g28740	HIS4	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.94	TaAffx.111405.1.S1_at	CA698977	-	-	1e+0	At1g62000	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.94	TaAffx.111583.1.S1_x_at	CA637262	-	-	1e+1	At5g02440	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.95	TaAffx.112158.1.S1_x_at	CA626538	-	-	2e+1	At3g28590	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.5	98.6	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.1	98.1	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.1	98.1	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.9	98.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.9	97.3	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.6	97.0	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.4	96.8	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.0	96.3	GSM138162	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.4	95.2	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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