Co-expression analysis

Gene ID	TaAffx.12702.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g35840: sucrose-phosphatase 1 (SPP1) (HF=4e-22)
Module size	6 genes
NF	0.04
%ile	11.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.74	TaAffx.12702.1.S1_at	BJ243315	-	-	4e-22	At2g35840	sucrose-phosphatase 1 (SPP1)	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.90	TaAffx.30064.1.S1_at	AJ614425	-	-	1e+1	At5g25340	unknown protein	O.I.	H.G.	S.X.	Please select
0.11	12.4	0.91	TaAffx.105190.1.S1_at	CA738918	-	-	1e+0	At4g37685	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.88	TaAffx.84948.1.S1_at	CA626902	-	-	7e-20	At4g29390	40S ribosomal protein S30 (RPS30B)	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.91	TaAffx.122081.2.S1_at	CA723648	-	-	3e+0	At5g64800	CLE21 (CLAVATA3/ESR-RELATED 21)	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.89	TaAffx.23620.1.S1_at	CA732659	-	-	9e-1	At4g04985	aspartic-type endopeptidase	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.1	99.4	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
8.8	98.9	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.1	98.8	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
7.9	98.7	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.8	98.7	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.5	98.6	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
7.4	98.6	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
6.9	98.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.9	98.0	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.6	97.0	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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