Co-expression analysis

Gene ID	TaAffx.122229.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g57300: UbiE/COQ5 methyltransferase family protein (HF=2e+1)
Module size	20 genes
NF	0.61
%ile	86.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.76	90.1	0.95	TaAffx.122229.1.S1_at	BG313852	-	-	2e+1	At5g57300	UbiE/COQ5 methyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.86	94.1	0.98	Ta.9308.2.S1_a_at	BE411983	-	-	2e+0	At3g61070	PEX11E	O.I.	H.G.	S.X.	Please select
0.79	91.3	0.97	Ta.12159.1.A1_at	BQ171711	-	-	5e-6	At4g18570	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.79	91.3	0.98	Ta.9308.1.S1_at	CK211929	-	-	4e-5	At1g01820	PEX11C (PEROXIN 11C)	O.I.	H.G.	S.X.	Please select
0.78	91.1	0.98	Ta.12169.1.S1_at	CD863887	-	-	1e+0	At1g16880	uridylyltransferase-related	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.97	TaAffx.217.1.A1_at	CD889063	-	-	2e-6	At1g68830	STN7 (Stt7 homolog STN7)	O.I.	H.G.	S.X.	Please select
0.69	86.9	0.97	TaAffx.116357.1.A1_at	BJ275093	-	-	5e-16	At1g77930	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.68	86.5	0.97	Ta.1121.1.S1_at	BG904461	-	-	2e-1	At4g02370	unknown protein	O.I.	H.G.	S.X.	Please select
0.65	83.9	0.97	Ta.14695.1.S1_at	CA680229	-	-	1e+0	At1g44414	unknown protein	O.I.	H.G.	S.X.	Please select
0.65	83.9	0.97	Ta.7722.3.S1_a_at	BE213326	-	-	2e+0	At3g52210	mRNA capping enzyme family protein	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.97	Ta.10093.1.A1_at	BJ248899	-	-	1e-1	At4g23890	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.97	Ta.9308.1.S1_x_at	CK211929	-	-	4e-5	At1g01820	PEX11C (PEROXIN 11C)	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.97	Ta.442.1.S1_at	D86327.1	catalase	-	1e-27	At4g35090	CAT2 (CATALASE 2)	O.I.	H.G.	S.X.	Please select
0.52	73.7	0.97	Ta.568.1.S1_at	BG908569	-	-	1e-24	At2g13360	AGT (ALANINE:GLYOXYLATE AMINOTRANSFERASE)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.98	Ta.28775.1.S1_x_at	CA680217	-	-	5e-39	At1g68010	HPR	O.I.	H.G.	S.X.	Please select
0.45	65.2	0.98	Ta.9308.2.S1_x_at	BE411983	-	-	2e+0	At3g61070	PEX11E	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.98	Ta.28197.1.S1_at	BQ620267	-	-	2e-60	At3g14420	(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative	O.I.	H.G.	S.X.	Please select
0.42	60.9	0.98	Ta.14673.1.S1_x_at	CA680572	-	-	4e+0	At3g06730	thioredoxin family protein	O.I.	H.G.	S.X.	Please select
0.41	59.6	0.97	Ta.9104.1.A1_at	CA731793	-	-	1e-7	At2g42750	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.97	Ta.22292.1.S1_at	CA736459	-	-	6e+0	At3g46666	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.1	99.2	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
4.8	97.2	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.6	97.0	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
4.2	96.6	GSM324491	Si+ B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.7	95.8	GSM324492	Si+ B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.5	95.4	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development
3.5	95.4	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM324490	Si+ B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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