Co-expression analysis

Gene ID	TaAffx.122147.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g36080: unknown protein (HF=1e-1)
Module size	6 genes
NF	0.46
%ile	71.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.93	TaAffx.122147.1.S1_at	CA637033	-	-	1e-1	At5g36080	unknown protein	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.92	TaAffx.5529.1.S1_at	CA707923	-	-	3e+0	At3g19760	eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putative	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.94	AFFX-Tae-r2-Bs-lys-3_at	AFFX-Tae-r2-Bs-lys-3	-	-			-	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.94	Ta.6416.2.S1_a_at	CA611148	-	-	1e+0	At2g31230	ATERF15 (Ethylene-responsive element binding factor 15)	O.I.	H.G.	S.X.	Please select
0.28	39.2	0.92	Ta.5667.3.S1_x_at	CA654491	-	-	1e+0	At5g63230	-	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.94	TaAffx.13113.1.S1_at	CD926575	-	-	1e-2	At5g02570	histone H2B, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.9	99.0	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.5	98.6	GSM138193	genotype B33 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.2	97.5	GSM111208	genotype F36 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.7	97.1	GSM138207	genotype B11 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.4	96.8	GSM111230	genotype B33 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.8	96.0	GSM111185	genotype C22 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.7	95.8	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
3.6	95.6	GSM111195	genotype C25 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.4	95.2	GSM138171	genotype C31 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.3	95.0	GSM111216	genotype D15 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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