Co-expression analysis

Gene ID TaAffx.121238.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g23840: MD-2-related lipid recognition domain-containing protein / ML domain-containing protein (HF=3e+0)
Module size 6 genes
NF 0.04
%ile 13.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8092.20.94TaAffx.121238.1.A1_atBG906992--3e+0At5g23840MD-2-related lipid recognition domain-containing protein / ML domain-containing proteinO.I.H.G.S.X.
0.2125.50.95TaAffx.84292.1.S1_atCA640524--2e+0At4g05070unknown proteinO.I.H.G.S.X.
0.2125.50.96Ta.25096.1.S1_atCA672140--9e-1At5g27020unknown proteinO.I.H.G.S.X.
0.078.60.96Ta.3659.2.S1_atCA659950--2e-1At4g16265NRPB9BO.I.H.G.S.X.
0.045.80.95TaAffx.11903.1.S1_atBJ319647--2e+0At5g62750unknown proteinO.I.H.G.S.X.
0.012.40.95Ta.14346.1.A1_atBQ236769--4e+0At1g76180ERD14 (EARLY RESPONSE TO DEHYDRATION 14)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.699.6GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
14.399.5GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
13.499.5GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
13.499.5GSM315202target strand labeled: Sense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
13.099.4GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
12.799.4GSM314285tissue type: 22 DAP embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
8.798.9GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.196.4GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.996.1GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.896.0GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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