Co-expression analysis

Gene ID TaAffx.120532.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g68320: MYB62 (myb domain protein 62) (HF=5e-1)
Module size 6 genes
NF 0.01
%ile 3.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.78TaAffx.120532.1.S1_atBJ224153--5e-1At1g68320MYB62 (myb domain protein 62)O.I.H.G.S.X.
0.034.70.91TaAffx.83597.1.S1_atCA730402--5e-1At3g54085-O.I.H.G.S.X.
0.023.60.92Ta.26218.1.S1_atCD452888--2e+0At5g13570DCP2 (DECAPPING 2)O.I.H.G.S.X.
0.012.40.90Ta.3083.2.A1_atBJ254365--4e+0At3g05602unknown proteinO.I.H.G.S.X.
0.012.40.92TaAffx.52752.1.S1_atCA702216--4e+0At5g62610basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.012.40.92TaAffx.31605.1.S1_atCA612038--1e-2At4g34370ARI1 (ARIADNE)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.899.1GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
9.199.0GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.398.6GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.397.6GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.596.9GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.596.9GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.896.0GSM298055Leaf tissue of Harnesk at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.595.4GSM143507Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.495.2GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.294.8GSM138193genotype B33 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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