Co-expression analysis

Gene ID TaAffx.120214.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g35250: thioesterase family protein (HF=4e-1)
Module size 6 genes
NF 0.38
%ile 61.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.87TaAffx.120214.1.S1_atBJ236251--4e-1At1g35250thioesterase family proteinO.I.H.G.S.X.
0.4464.50.97TaAffx.122592.1.S1_atCD863543--1e-16At3g01150PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)O.I.H.G.S.X.
0.4464.50.97Ta.4504.3.S1_atBJ208637--1e-3At1g17520DNA-binding protein, putativeO.I.H.G.S.X.
0.2735.60.96TaAffx.110854.1.S1_atCA730050--2e+1At5g48655zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2532.10.96Ta.7416.2.S1_a_atCA639298--1e-1At5g60230SEN2 (splicing endonuclease 2)O.I.H.G.S.X.
0.2125.50.97Ta.14364.3.S1_x_atBJ216082--7e-12At1g17130cell cycle control protein-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.398.2GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.597.8GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.797.1GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.496.8GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.196.4GSM298073Crown tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.196.4GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.795.8GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.495.2GSM298064Crown tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.294.8GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.194.5GSM298072Crown tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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