Co-expression analysis

Gene ID	TaAffx.120214.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g35250: thioesterase family protein (HF=4e-1)
Module size	6 genes
NF	0.38
%ile	61.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.87	TaAffx.120214.1.S1_at	BJ236251	-	-	4e-1	At1g35250	thioesterase family protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.97	TaAffx.122592.1.S1_at	CD863543	-	-	1e-16	At3g01150	PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.97	Ta.4504.3.S1_at	BJ208637	-	-	1e-3	At1g17520	DNA-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.96	TaAffx.110854.1.S1_at	CA730050	-	-	2e+1	At5g48655	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.96	Ta.7416.2.S1_a_at	CA639298	-	-	1e-1	At5g60230	SEN2 (splicing endonuclease 2)	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.97	Ta.14364.3.S1_x_at	BJ216082	-	-	7e-12	At1g17130	cell cycle control protein-related	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.3	98.2	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.5	97.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.7	97.1	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.4	96.8	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.1	96.4	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7	95.8	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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