Co-expression analysis

Gene ID TaAffx.119890.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g59110: protein kinase family protein (HF=2e-2)
Module size 6 genes
NF 0.01
%ile 4.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.88TaAffx.119890.1.A1_atBJ253433--2e-2At3g59110protein kinase family proteinO.I.H.G.S.X.
0.067.60.91TaAffx.85361.1.S1_atCA623405--4e+0At3g50800unknown proteinO.I.H.G.S.X.
0.056.70.94Ta.10664.1.A1_atBQ166228--4e+0At1g29418unknown proteinO.I.H.G.S.X.
0.045.80.93Ta.3478.3.S1_x_atCA637826--2e-11At1g69670CUL3B (CULLIN 3B)O.I.H.G.S.X.
0.012.40.94Ta.3028.1.A1_atCA501988--2e-3At5g05660ATNFXL2O.I.H.G.S.X.
-0.70.94Ta.7416.1.A1_atBJ265665--2e+0At5g63530ATFP3O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.199.0GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
6.198.1GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.797.1GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.296.6GSM314271tissue type: immature inflorescence - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.996.1GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.294.8GSM138192genotype B33 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.893.6GSM298064Crown tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.893.6GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.692.9GSM298071Crown tissue of Paragon at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.692.9GSM298063Crown tissue of Harnesk at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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