Co-expression analysis

Gene ID	TaAffx.119476.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g07240: UGT71C5 (UDP-GLUCOSYL TRANSFERASE 71C5) (HF=1e+0)
Module size	25 genes
NF	0.52
%ile	78.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	89.1	0.93	TaAffx.119476.1.S1_at	BJ241080	-	-	1e+0	At1g07240	UGT71C5 (UDP-GLUCOSYL TRANSFERASE 71C5)	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.95	TaAffx.112158.1.S1_at	CA626538	-	-	2e+1	At3g28590	unknown protein	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.95	TaAffx.29732.1.S1_at	CA636473	-	-	7e-1	At4g14550	IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.94	TaAffx.30598.1.S1_at	CA623743	-	-	1e+0	At3g05230	signal peptidase subunit family protein	O.I.	H.G.	S.X.	Please select
0.64	83.6	0.95	TaAffx.112158.1.S1_x_at	CA626538	-	-	2e+1	At3g28590	unknown protein	O.I.	H.G.	S.X.	Please select
0.64	83.6	0.95	TaAffx.58638.1.S1_at	CA617698	-	-	4e+0	At1g12805	nucleotide binding	O.I.	H.G.	S.X.	Please select
0.58	79.2	0.95	TaAffx.50210.1.S1_at	CA744417	-	-	7e-2	At1g60880	AGL56	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.95	TaAffx.25008.1.S1_at	CA708299	-	-	1e+1	At5g24370	invertase/pectin methylesterase inhibitor family protein	O.I.	H.G.	S.X.	Please select
0.56	78.6	0.94	TaAffx.4913.1.S1_at	CA728728	-	-	2e+1	At5g67060	HEC1 (HECATE 1)	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.95	TaAffx.30673.1.S1_at	CA623010	-	-	7e-11	At4g25630	FIB2 (FIBRILLARIN 2)	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.95	Ta.9084.3.S1_at	CA666296	-	-	1e+1	At5g50050	invertase/pectin methylesterase inhibitor family protein	O.I.	H.G.	S.X.	Please select
0.51	73.0	0.94	TaAffx.114767.1.S1_at	CA723425	-	-	3e-3	At4g17600	LIL3:1	O.I.	H.G.	S.X.	Please select
0.49	69.7	0.95	TaAffx.35493.1.S1_at	BQ606743	-	-	4e+0	At5g07460	PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2)	O.I.	H.G.	S.X.	Please select
0.49	69.7	0.95	TaAffx.64591.1.S1_at	BJ288225	-	-	1e+0	At1g19010	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.95	TaAffx.119035.1.A1_at	BJ295436	-	-	1e+0	At2g13720	ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing)	O.I.	H.G.	S.X.	Please select
0.45	65.2	0.95	TaAffx.78861.1.S1_at	CA725589	-	-	1e+1	At3g28070	nodulin MtN21 family protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.95	TaAffx.79437.1.S1_at	CA715704	-	-	3e+0	At1g02680	TAF13 (TBP-ASSOCIATED FACTOR 13)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.95	TaAffx.58533.1.S1_at	CA618813	-	-	1e+0	At5g47700	60S acidic ribosomal protein P1 (RPP1C)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.96	Ta.3911.2.S1_s_at	CA604151	-	-	4e+0	At2g44290	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3)	O.I.	H.G.	S.X.	Please select
0.42	60.9	0.95	TaAffx.56155.1.S1_at	CA656564	-	-	1e+1	At5g26070	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.41	59.6	0.94	TaAffx.115939.2.S1_at	CA677586	-	-	7e-2	At1g30800	-	O.I.	H.G.	S.X.	Please select
0.41	59.6	0.95	TaAffx.3664.1.S1_at	CD876496	-	-	2e+0	At2g47710	universal stress protein (USP) family protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.96	TaAffx.55653.1.S1_at	CA663094	-	-	1e+1	At4g20030	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.95	Ta.3203.2.S1_x_at	CA621738	-	-	5e-6	At1g27530	-	O.I.	H.G.	S.X.	Please select
0.28	39.2	0.95	TaAffx.73323.1.S1_at	CA713945	-	-	3e+0	At5g45870	Bet v I allergen family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.8	98.4	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.6	98.3	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.4	98.2	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.7	97.9	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
5.4	97.7	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.9	97.3	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5	96.9	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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