Co-expression analysis

Gene ID	TaAffx.118944.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g51720: unknown protein (HF=4e-1)
Module size	6 genes
NF	0.11
%ile	23.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	0.98	TaAffx.118944.1.S1_at	CD923245	-	-	4e-1	At5g51720	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.98	Ta.27380.1.S1_at	CA667784	-	-	1e+1	At5g38790	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.98	Ta.1871.2.S1_a_at	BJ294482	-	-	8e+0	At4g29020	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.98	Ta.9442.1.S1_at	CK194226	-	-	9e-1	At2g04520	eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative	O.I.	H.G.	S.X.	Please select
0.09	10.4	0.98	Ta.23445.1.S1_at	BJ261353	-	-	1e+0	At3g25150	nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.04	5.8	0.98	Ta.824.1.S1_a_at	BJ263208	Ribosomal protein L10A	-	8e-49	At5g22440	60S ribosomal protein L10A (RPL10aC)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.8	97.2	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.2	94.8	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM298074	Crown tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.8	93.6	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
2.7	93.3	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
2.7	93.3	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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