Co-expression analysis

Gene ID	TaAffx.118620.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g31560: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.67
%ile	91.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	93.4	0.96	TaAffx.118620.1.S1_at	BJ316617	-	-	1e+0	At2g31560	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	TaAffx.78517.1.S1_at	CA731451	-	-	4e+0	At2g25720	unknown protein	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.96	TaAffx.73323.1.S1_at	CA713945	-	-	3e+0	At5g45870	Bet v I allergen family protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.96	Ta.30411.1.S1_at	CK209297	-	-	5e+0	At5g62280	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.96	TaAffx.4857.1.S1_at	CA730111	-	-	4e+0	At1g77682	-	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.96	TaAffx.79437.1.S1_at	CA715704	-	-	3e+0	At1g02680	TAF13 (TBP-ASSOCIATED FACTOR 13)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.2	99.5	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
12.4	99.4	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
12.4	99.4	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
7.9	98.7	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.1	98.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.9	98.4	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.4	98.2	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.3	97.6	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
4.5	96.9	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7	95.8	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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