Co-expression analysis

Gene ID	TaAffx.118169.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g35720: DNAJ heat shock N-terminal domain-containing protein (HF=1e-10)
Module size	7 genes
NF	0.58
%ile	84.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.56	78.6	0.95	TaAffx.118169.1.S1_at	BJ292465	-	-	1e-10	At2g35720	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.96	TaAffx.77786.1.S1_at	CA742947	-	-	4e+0	At5g17360	-	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.97	Ta.24123.2.S1_at	BE517942	-	-	6e+0	At5g51900	cytochrome P450 family	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.97	Ta.6277.2.S1_at	BJ301167	-	-	2e-16	At5g17410	tubulin family protein	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.96	TaAffx.81976.1.S1_s_at	CA679498	-	-	1e+0	At4g24950	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.96	Ta.7558.3.S1_a_at	BQ609768	-	-	3e-1	At4g12060	Clp amino terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.42	60.9	0.96	Ta.4582.2.S1_a_at	CA662815	-	-	4e+0	At3g54260	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.3	97.6	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM138171	genotype C31 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.8	93.6	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.8	93.6	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.6	92.9	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.5	92.5	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.5	92.5	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.4	92.0	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.4	92.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.4	92.0	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage