Co-expression analysis

Gene ID TaAffx.117173.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g55135: unknown protein (HF=2e+1)
Module size 37 genes
NF 0.25
%ile 41.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8994.60.90TaAffx.117173.1.S1_atBQ608944--2e+1At5g55135unknown proteinO.I.H.G.S.X.
0.5678.60.94TaAffx.120891.1.S1_atCN009837--3e+1At5g40730AGP24O.I.H.G.S.X.
0.4058.40.95Ta.10185.2.S1_a_atCA647874--4e-1At1g21410SKP2AO.I.H.G.S.X.
0.3956.10.94TaAffx.17257.1.S1_atCA613987--1e-5At5g13400proton-dependent oligopeptide transport (POT) family proteinO.I.H.G.S.X.
0.3956.10.92TaAffx.52305.1.S1_atCA709648--3e+0At4g39880ribosomal protein L23 family proteinO.I.H.G.S.X.
0.3854.70.92Ta.28595.2.S1_x_atCD889856--1e+0At1g75050-O.I.H.G.S.X.
0.3651.90.92Ta.15389.2.S1_a_atCA731375--4e+0At2g01360-O.I.H.G.S.X.
0.3651.90.95Ta.3418.1.S1_x_atCK214532glutathione transferase F5-6e-1At5g54430universal stress protein (USP) family proteinO.I.H.G.S.X.
0.3346.90.93TaAffx.65450.1.S1_atBJ245807--1e+0At4g36990HSF4 (HEAT SHOCK FACTOR 4)O.I.H.G.S.X.
0.3346.90.94Ta.8953.1.S1_a_atBJ232632--1e+0At4g05230ubiquitin family proteinO.I.H.G.S.X.
0.3244.40.95Ta.5667.1.S1_atCD454421--7e-1At4g38781unknown proteinO.I.H.G.S.X.
0.2839.20.95Ta.8953.1.S1_x_atBJ232632--1e+0At4g05230ubiquitin family proteinO.I.H.G.S.X.
0.2839.20.95Ta.8953.2.A1_x_atBJ266322--2e+0At2g42240nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.2735.60.92Ta.22625.1.A1_atCA666706--5e+0At1g24580zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2633.60.93TaAffx.31724.1.S1_atCA609090--2e+0At1g43680-O.I.H.G.S.X.
0.2532.10.95TaAffx.56573.1.S1_x_atCA648874--9e+0At4g02840small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeO.I.H.G.S.X.
0.2532.10.97Ta.10680.1.S1_atBJ242691--8e-1At3g47800aldose 1-epimerase family proteinO.I.H.G.S.X.
0.2430.30.96TaAffx.24786.1.S1_atCA712353--4e+0At5g11680unknown proteinO.I.H.G.S.X.
0.2430.30.92Ta.10347.1.S1_x_atBJ234537--3e+0At3g21055PSBTN (photosystem II subunit T)O.I.H.G.S.X.
0.2329.00.97Ta.2870.2.S1_atBJ284170--3e-31At3g17820ATGSKB6O.I.H.G.S.X.
0.2329.00.93TaAffx.12729.1.A1_atBJ240193--1e+0At4g13600-O.I.H.G.S.X.
0.2227.10.95Ta.5516.2.S1_x_atCA703744--3e-13At4g23470hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.2227.10.95Ta.10164.2.S1_a_atCA601625--2e+1At5g12190RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.2125.50.94TaAffx.106383.1.S1_s_atCA719491--6e-6At1g49960xanthine/uracil permease family proteinO.I.H.G.S.X.
0.2024.00.95Ta.8252.1.A1_atBG313096--5e+0At3g60700unknown proteinO.I.H.G.S.X.
0.1922.40.94Ta.9064.2.S1_s_atBJ274048--4e+0At3g54340AP3 (APETALA 3)O.I.H.G.S.X.
0.1922.40.95Ta.5516.3.S1_x_atCA652702--4e-17At4g23470hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.1821.00.94Ta.6663.3.S1_x_atBJ312241--4e+0At5g62360invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.1821.00.93Ta.1944.1.S1_atAF092524.1manganese superoxide dismutase-1e-10At3g56350superoxide dismutase (Mn), putative / manganese superoxide dismutase, putativeO.I.H.G.S.X.
0.1719.80.95Ta.8296.1.S1_atAY543533.1expansin EXPA7-2e-1At1g62333unknown proteinO.I.H.G.S.X.
0.1618.20.96Ta.30759.2.A1_a_atCA608414--4e+0At4g32360NADP adrenodoxin-like ferredoxin reductaseO.I.H.G.S.X.
0.1618.20.96Ta.4304.2.S1_a_atCA640847--4e+0At4g25130peptide methionine sulfoxide reductase, putativeO.I.H.G.S.X.
0.1517.10.96Ta.20658.1.S1_x_atBQ236450--4e-1At3g06130heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.1517.10.92TaAffx.67122.1.S1_atBJ251993--4e-1At3g29280unknown proteinO.I.H.G.S.X.
0.1213.30.96Ta.3418.2.S1_x_atBQ804925--2e+0At5g26890unknown proteinO.I.H.G.S.X.
0.1213.30.96Ta.10108.3.S1_a_atBJ307443--2e-8At2g35155catalyticO.I.H.G.S.X.
0.1213.30.96Ta.21020.1.S1_atCD895774--3e+0At3g57710protein kinase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.098.5GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
6.398.2GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.795.8GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.795.8GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.194.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.094.3GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.893.6GSM314271tissue type: immature inflorescence - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
2.793.3GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.692.9GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.692.9GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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