Co-expression analysis

Gene ID TaAffx.117057.1.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At4g39960: DNAJ heat shock family protein (HF=3e-9)
Module size 6 genes
NF 0.68
%ile 91.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8092.20.98TaAffx.117057.1.S1_s_atCA719086--3e-9At4g39960DNAJ heat shock family proteinO.I.H.G.S.X.
0.7389.10.98TaAffx.97533.4.S1_atCA667394--6e-5At2g28800ALB3 (ALBINO 3)O.I.H.G.S.X.
0.6786.30.98TaAffx.97533.4.S1_x_atCA667394--6e-5At2g28800ALB3 (ALBINO 3)O.I.H.G.S.X.
0.5979.80.98Ta.28015.1.S1_atBE496816--2e-7At5g11450oxygen-evolving complex-relatedO.I.H.G.S.X.
0.5576.80.98Ta.27727.1.S1_atCA618225--6e-1At5g18520-O.I.H.G.S.X.
0.4666.80.98TaAffx.65878.1.S1_s_atBJ225204--1e+1At4g22666-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.899.5GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
10.899.2GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
9.999.1GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
9.599.1GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
8.798.9GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
8.198.8GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.098.5GSM298077Leaf tissue of Solstice at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.798.4GSM298079Leaf tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.698.3GSM298078Leaf tissue of Solstice at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.498.2GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, Gma.10069.1.S1_at, orthologous to the query gene, TaAffx.117057.1.S1_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8291.9Gma.10069.1.S1_atAt4g39960--1e-18At4g39960DNAJ heat shock family proteinO.I.H.G.S.X.
0.7589.5Gma.1487.1.A1_atAt4g39960--7e-16At2g34460flavin reductase-relatedO.I.H.G.S.X.
0.6786.1Gma.13877.1.A1_atAt4g39960--2e-27At1g31190IMPL1 (MYO-INOSITOL MONOPHOSPHATASE LIKE 1)O.I.H.G.S.X.
0.6080.7Gma.7276.1.S1_atAt4g39960--2e-31At1g45230defective chloroplasts and leaves protein-related / DCL protein-relatedO.I.H.G.S.X.
0.5979.5Gma.7906.1.S1_atAt4g39960--7e-9At1g63610unknown proteinO.I.H.G.S.X.
0.5979.5Gma.2654.1.S1_atAt4g39960--5e-63At2g43945unknown proteinO.I.H.G.S.X.
0.5778.8GmaAffx.81837.1.S1_atAt4g39960--5e-81At4g17040ATP-dependent Clp protease proteolytic subunit, putativeO.I.H.G.S.X.
0.5474.8Gma.7497.1.S1_atAt4g39960OAS-TL4 cysteine synthase (OAS-TL4)-7e-60At2g43750OASB (O-ACETYLSERINE (THIOL) LYASE B)O.I.H.G.S.X.
0.5071.7Gma.7297.1.A1_atAt4g39960--1e+0At5g05510protein kinase-relatedO.I.H.G.S.X.
0.4158.1Gma.7497.1.S1_a_atAt4g39960OAS-TL4 cysteine synthase-7e-60At2g43750OASB (O-ACETYLSERINE (THIOL) LYASE B)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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