Co-expression analysis

Gene ID	TaAffx.1170.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g39240: unknown protein (HF=5e-3)
Module size	6 genes
NF	0.02
%ile	6.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.87	TaAffx.1170.1.S1_at	CK210809	-	-	5e-3	At5g39240	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.96	TaAffx.77895.1.S1_at	CA741079	-	-	1e+0	At5g62340	invertase/pectin methylesterase inhibitor family protein	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.95	TaAffx.83300.1.S1_x_at	CA659037	-	-	4e-3	At4g30220	RUXF (SMALL NUCLEAR RIBONUCLEOPROTEIN F)	O.I.	H.G.	S.X.	Please select
0.05	6.7	0.94	TaAffx.55985.1.S1_at	CA658782	-	-	3e-7	At1g54270	EIF4A-2	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.96	Ta.17369.2.S1_a_at	CA620173	-	-	4e+0	At1g69790	protein kinase, putative	O.I.	H.G.	S.X.	Please select
-	0.7	0.95	Ta.28647.1.S1_at	BJ275242	-	-	6e-78	At1g08360	60S ribosomal protein L10A (RPL10aA)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.9	98.7	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
5.5	97.8	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
5.1	97.5	GSM138188	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.7	97.1	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.4	96.8	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM138199	genotype C22 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.2	94.8	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
3.2	94.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1	94.5	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.8	93.6	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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