Co-expression analysis

Gene ID TaAffx.115985.2.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At1g72550: tRNA synthetase beta subunit family protein (HF=6e-2)
Module size 11 genes
NF 0.54
%ile 80.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6583.90.95TaAffx.115985.2.S1_s_atBQ606839--6e-2At1g72550tRNA synthetase beta subunit family proteinO.I.H.G.S.X.
0.6986.90.95TaAffx.113412.1.S1_atCA613171--2e-2At4g27640importin beta-2 subunit family proteinO.I.H.G.S.X.
0.6383.10.95TaAffx.36970.1.S1_atCA729570--2e+0At2g36920unknown proteinO.I.H.G.S.X.
0.6182.00.95TaAffx.119455.1.S1_atCK207960--9e-2At1g75550glycine-rich proteinO.I.H.G.S.X.
0.5979.80.95TaAffx.110383.1.S1_atCA659516--4e+0At5g66390peroxidase 72 (PER72) (P72) (PRXR8)O.I.H.G.S.X.
0.5678.60.95TaAffx.82005.1.S1_atCK208610--6e-4At4g16630DEAD/DEAH box helicase, putative (RH28)O.I.H.G.S.X.
0.5072.40.94TaAffx.93088.1.S1_atCA730354--7e-10At4g31120SKB1 (SHK1 BINDING PROTEIN 1)O.I.H.G.S.X.
0.5072.40.96TaAffx.120650.1.S1_s_atBG608388--2e+0At2g40080ELF4 (EARLY FLOWERING 4)O.I.H.G.S.X.
0.4362.20.95TaAffx.82522.1.S1_atCA675368--4e+0At5g05110cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.
0.3651.90.95Ta.29398.1.S1_atBJ209080--1e+0At1g08380PSAO (photosystem I subunit O)O.I.H.G.S.X.
0.3244.40.96Ta.1178.2.S1_atBG909050--1e-1At2g07775unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.098.8GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.396.7GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.595.4GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.595.4GSM139917Anther leptotene-pachytene rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.495.2GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.495.2GSM139915Anther pre-meiosis rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.395.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.294.8GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.294.8GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.194.5GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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