Co-expression analysis

Gene ID	TaAffx.114398.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g26670: VTI1B (HF=6e-1)
Module size	6 genes
NF	0.03
%ile	8.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.92	TaAffx.114398.1.S1_at	CA593807	-	-	6e-1	At1g26670	VTI1B	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.94	TaAffx.57873.1.S1_x_at	CA624322	-	-	1e+1	At4g01935	unknown protein	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.95	TaAffx.113263.11.S1_at	CA601426	-	-	5e-6	At5g65360	histone H3	O.I.	H.G.	S.X.	Please select
0.09	10.4	0.96	Ta.1960.1.S1_at	BG604531	-	-	9e-15	At1g73350	unknown protein	O.I.	H.G.	S.X.	Please select
0.08	9.4	0.96	TaAffx.79226.1.S1_at	CA719465	-	-	4e-3	At5g59690	histone H4	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.94	Ta.3544.3.S1_x_at	BQ169086	-	-	4e-10	At1g76860	small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.6	98.7	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.9	98.4	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.8	98.4	GSM298063	Crown tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.0	98.0	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.6	97.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.4	97.7	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.0	97.4	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.7	97.1	GSM298060	Crown tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.7	97.1	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.4	96.8	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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