Co-expression analysis

Gene ID TaAffx.113916.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g36280: adenylosuccinate lyase, putative / adenylosuccinase, putative (HF=7e-5)
Module size 6 genes
NF 0.41
%ile 65.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5576.80.95TaAffx.113916.1.S1_atCA601471--7e-5At1g36280adenylosuccinate lyase, putative / adenylosuccinase, putativeO.I.H.G.S.X.
0.5979.80.95TaAffx.115985.2.S1_s_atBQ606839--6e-2At1g72550tRNA synthetase beta subunit family proteinO.I.H.G.S.X.
0.5374.90.96Ta.1178.2.S1_atBG909050--1e-1At2g07775unknown proteinO.I.H.G.S.X.
0.5072.40.96Ta.2127.3.S1_a_atCA731487--6e-33At5g11170ATP binding / ATP-dependent helicase/ helicase/ nucleic acid bindingO.I.H.G.S.X.
0.4362.20.96TaAffx.118169.1.S1_atBJ292465--1e-10At2g35720DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.2024.00.95Ta.3075.2.S1_x_atCA601469--4e-14At3g04600tRNA synthetase class I (W and Y) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.896.0GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.896.0GSM298084Crown tissue of Solstice at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.695.6GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.595.4GSM298083Crown tissue of Solstice at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.395.0GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.294.8GSM298086Crown tissue of Solstice at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.194.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.194.5GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.094.3GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.094.3GSM298062Crown tissue of Harnesk at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.86903.1.S1_at, orthologous to the query gene, TaAffx.113916.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9093.7GmaAffx.86903.1.S1_atAt1g36280--3e-43At1g36280adenylosuccinate lyase, putative / adenylosuccinase, putativeO.I.H.G.S.X.
0.6080.7Gma.745.1.S1_a_atAt1g36280--3e-11At5g67590FRO1 (FROSTBITE1)O.I.H.G.S.X.
0.6080.7Gma.6428.1.S1_atAt1g36280--4e-26At1g05350thiF family proteinO.I.H.G.S.X.
0.5878.8Gma.3948.1.S1_atAt1g36280--2e-28At2g46290eukaryotic translation initiation factor 3 subunit 2, putative / eIF-3 beta, putative / eIF3i, putativeO.I.H.G.S.X.
0.5878.8Gma.448.2.S1_a_atAt1g36280--3e-21At3g60820PBF1O.I.H.G.S.X.
0.5678.2GmaAffx.8005.2.S1_atAt1g36280--4e-67At2g03120ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE)O.I.H.G.S.X.
0.4867.7Gma.10826.2.S1_atAt1g36280--8e-9At5g1613040S ribosomal protein S7 (RPS7C)O.I.H.G.S.X.
0.4867.7Gma.4484.1.S1_atAt1g36280--5e-37At1g16780vacuolar-type H+-translocating inorganic pyrophosphatase, putativeO.I.H.G.S.X.
0.4867.7Gma.10826.6.S1_x_atAt1g36280--6e-93At5g55190RAN3 (RAN GTPASE 3)O.I.H.G.S.X.
0.4867.7Gma.7305.1.S1_atAt1g36280--2e-42At3g44330-O.I.H.G.S.X.
0.4665.5GmaAffx.90058.1.S1_s_atAt1g36280--1e-9At1g24510T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putativeO.I.H.G.S.X.
0.4563.9Gma.2905.1.S1_atAt1g36280--4e-172At4g29040RPT2a (regulatory particle AAA-ATPase 2a)O.I.H.G.S.X.
0.4360.6Gma.4035.1.S1_atAt1g36280--1e-38At5g11560catalyticO.I.H.G.S.X.
0.4158.1Gma.17740.1.S1_atAt1g36280--2e-61At3g0556060S ribosomal protein L22-2 (RPL22B)O.I.H.G.S.X.
0.4158.1Gma.12022.1.S1_atAt1g36280--4e-8At3g57000nucleolar essential protein-relatedO.I.H.G.S.X.
0.4057.1Gma.1373.1.S1_a_atAt1g36280--7e-31At5g2390060S ribosomal protein L13 (RPL13D)O.I.H.G.S.X.
0.4057.1Gma.6284.1.S1_atAt1g36280--8e-8At1g64220TOM7-2 (TRANSLOCASE OF OUTER MEMBRANE 7 KDA SUBUNIT 2)O.I.H.G.S.X.
0.4057.1Gma.1449.1.S1_s_atAt1g36280nucleoside diphosphate kinase-5e-41At4g09320NDPK1O.I.H.G.S.X.
0.3954.5GmaAffx.93249.1.S1_s_atAt1g36280--5e-35At4g3467040S ribosomal protein S3A (RPS3aB)O.I.H.G.S.X.
0.3954.5Gma.16563.3.S1_a_atAt1g36280--9e-14At5g4562026S proteasome regulatory subunit, putative (RPN9)O.I.H.G.S.X.
0.3853.3Gma.8460.1.S1_atAt1g36280acyl-CoA oxidase-7e-39At4g16760ACX1 (ACYL-COA OXIDASE 1)O.I.H.G.S.X.
0.3751.7Gma.6263.1.S1_atAt1g36280--2e-112At1g79550PGK (PHOSPHOGLYCERATE KINASE)O.I.H.G.S.X.
0.3548.6Gma.3887.1.S1_atAt1g36280--2e+0At3g16120dynein light chain, putativeO.I.H.G.S.X.
0.3548.6GmaAffx.7362.1.S1_atAt1g36280--1e-10At5g10880tRNA synthetase-related / tRNA ligase-relatedO.I.H.G.S.X.
0.3548.6Gma.11133.1.S1_s_atAt1g36280--2e-28At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeO.I.H.G.S.X.
0.3447.2Gma.11223.1.S1_atAt1g36280--4e-169At3g28710H+-transporting two-sector ATPase, putativeO.I.H.G.S.X.
0.3346.1Gma.4383.1.S1_a_atAt1g36280--9e-34At1g64520RPN12a (Regulatory Particle non-ATPase 12a)O.I.H.G.S.X.
0.3346.1Gma.8179.1.S1_atAt1g36280--2e-19At3g18860transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.3142.2GmaAffx.92081.1.S1_atAt1g36280--1e-3At1g47420-O.I.H.G.S.X.
0.3142.2Gma.6161.1.S1_atAt1g36280--1e-38At1g33140PGY2 (PIGGYBACK2)O.I.H.G.S.X.
0.2839.0Gma.17344.1.S1_atAt1g36280--7e-41At2g33040ATP synthase gamma chain, mitochondrial (ATPC)O.I.H.G.S.X.
0.2633.9Gma.11225.1.S1_s_atAt1g36280--1e-97At1g14320SAC52 (SUPPRESSOR OF ACAULIS 52)O.I.H.G.S.X.
0.2126.6Gma.17905.2.S1_atAt1g36280--8e-37At4g01320ATSTE24O.I.H.G.S.X.
0.2025.1Gma.13142.2.S1_a_atAt1g36280--2e-13At5g15220ribosomal protein L27 family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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