Co-expression analysis

Gene ID	TaAffx.113766.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g35737: unknown protein (HF=1e+1)
Module size	11 genes
NF	0.23
%ile	38.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.78	91.1	0.76	TaAffx.113766.1.S1_at	CA605482	-	-	1e+1	At5g35737	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.88	TaAffx.83096.1.S1_at	CA662119	-	-	1e+0	At5g44210	ERF9 (ERF DOMAIN PROTEIN 9)	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.86	TaAffx.83096.1.S1_x_at	CA662119	-	-	1e+0	At5g44210	ERF9 (ERF DOMAIN PROTEIN 9)	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.92	Ta.17218.1.S1_at	CA618872	-	-	2e+1	At5g08260	scpl35 (serine carboxypeptidase-like 35)	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.92	TaAffx.52324.1.S1_at	CA709316	-	-	1e+0	At2g21220	auxin-responsive protein, putative	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.87	TaAffx.25597.1.S1_at	CA697956	-	-	1e+0	At4g29740	CKX4 (CYTOKININ OXIDASE 4)	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.88	TaAffx.23480.1.S1_at	CA734723	-	-	1e+0	At5g58920	unknown protein	O.I.	H.G.	S.X.	Please select
0.13	14.6	0.82	TaAffx.29077.1.S1_at	CA650817	-	-	1e+1	At5g51795	Kin17 DNA-binding protein-related	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.90	TaAffx.81141.1.S1_at	CA689176	-	-	1e+0	At3g52760	integral membrane Yip1 family protein	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.86	TaAffx.30857.1.S1_at	CA621554	-	-	3e+0	At5g21010	ATBPM5 (BTB-POZ and MATH domain 5)	O.I.	H.G.	S.X.	Please select
0.09	10.4	0.90	Ta.24889.1.S1_at	CA673235	-	-	1e-24	At5g56010	HSP81-3	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.3	99.4	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
12.0	99.4	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
8.1	98.8	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.6	98.7	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.6	97.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.4	97.7	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.0	97.4	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.9	97.3	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.7	97.1	GSM298078	Leaf tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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