Co-expression analysis

Gene ID	TaAffx.113024.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At3g27270: - (HF=2e+1)
Module size	13 genes
NF	0.64
%ile	89.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	81.0	0.84	TaAffx.113024.1.S1_s_at	CA621356	-	-	2e+1	At3g27270	-	O.I.	H.G.	S.X.	Please select
0.82	92.7	0.94	TaAffx.113686.2.S1_at	CA607016	-	-	2e+1	At3g56130	biotin/lipoyl attachment domain-containing protein	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.93	TaAffx.55852.1.S1_at	CA660360	-	-	6e-1	At1g70895	CLE17 (CLAVATA3/ESR-RELATED 17)	O.I.	H.G.	S.X.	Please select
0.69	86.9	0.88	Ta.9062.2.S1_at	CA682773	-	-	2e-1	At4g09180	basic helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.88	Ta.17745.1.S1_at	CA623999	-	-	2e+1	At5g65480	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.90	TaAffx.29257.1.S1_at	CA646899	-	-	4e+0	At2g44290	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.91	TaAffx.112355.1.S1_at	CA618883	-	-	4e+0	At2g17080	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.91	TaAffx.106672.1.S1_at	CA713886	-	-	3e+0	At4g25700	BETA-OHASE 1 (BETA-HYDROXYLASE 1)	O.I.	H.G.	S.X.	Please select
0.65	83.9	0.88	TaAffx.119260.2.S1_at	CA680043	-	-	1e+0	At1g60815	RALFL7 (RALF-LIKE 7)	O.I.	H.G.	S.X.	Please select
0.64	83.6	0.91	TaAffx.52385.1.S1_at	CA708316	-	-	4e+0	At1g05930	DNA binding	O.I.	H.G.	S.X.	Please select
0.59	79.8	0.91	TaAffx.8301.2.S1_s_at	CA627623	-	-	5e-1	At5g19875	unknown protein	O.I.	H.G.	S.X.	Please select
0.56	78.6	0.91	TaAffx.5802.3.S1_at	CA616764	-	-	1e+0	At4g26170	unknown protein	O.I.	H.G.	S.X.	Please select
0.28	39.2	0.91	TaAffx.78823.1.S1_at	CA726815	-	-	4e+0	At5g26840	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
30.2	99.8	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
11.2	99.3	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
9.0	99.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.8	98.4	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.7	97.9	GSM314289	tissue type: 22 DAP endosperm - rep3	GSE12508	Transcription patterns during wheat development
5.5	97.8	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
5.4	97.7	GSM314288	tissue type: 22 DAP endosperm - rep2	GSE12508	Transcription patterns during wheat development
4.6	97.0	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.6	97.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.6	97.0	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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