Co-expression analysis

Gene ID TaAffx.112788.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g20900: ESC (ESCAROLA) (HF=8e-1)
Module size 18 genes
NF 0.16
%ile 30.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9498.90.90TaAffx.112788.1.S1_atCA620934--8e-1At1g20900ESC (ESCAROLA)O.I.H.G.S.X.
0.4159.60.95TaAffx.110697.1.S1_atCA679731--4e+0At1g47450unknown proteinO.I.H.G.S.X.
0.3651.90.94TaAffx.30782.1.S1_atCA622085--2e+1At5g55200co-chaperone grpE protein, putativeO.I.H.G.S.X.
0.3142.70.94Ta.6666.2.S1_a_atCA640317--5e-12At3g49420Got1-like family proteinO.I.H.G.S.X.
0.3040.90.95TaAffx.31313.1.S1_atCA617546--1e+1At3g52561unknown proteinO.I.H.G.S.X.
0.2939.20.93TaAffx.43432.1.S1_atCA612748--9e+0At5g30495-O.I.H.G.S.X.
0.2839.20.93Ta.6231.3.S1_x_atCA694238--7e-5At5g02270ATNAP9O.I.H.G.S.X.
0.2735.60.95TaAffx.26470.1.S1_atCA688638--4e+0At4g21610LOL2 (LSD ONE LIKE 2)O.I.H.G.S.X.
0.2735.60.94TaAffx.79957.1.S1_atCA705158--6e-5At3g45610Dof-type zinc finger domain-containing proteinO.I.H.G.S.X.
0.2633.60.94TaAffx.23723.1.S1_atCA731348--2e+1At5g09445unknown proteinO.I.H.G.S.X.
0.1922.40.94Ta.28609.1.S1_x_atCK217364--8e-15At2g1975040S ribosomal protein S30 (RPS30A)O.I.H.G.S.X.
0.1922.40.95Ta.9084.3.S1_atCA666296--1e+1At5g50050invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.1821.00.95TaAffx.3664.1.S1_atCD876496--2e+0At2g47710universal stress protein (USP) family proteinO.I.H.G.S.X.
0.1314.60.95TaAffx.131315.1.S1_atBJ278064--2e-5At4g09810transporter-relatedO.I.H.G.S.X.
0.1213.30.93TaAffx.6504.1.S1_atCA684492--6e-2At2g14110-O.I.H.G.S.X.
0.0910.40.94Ta.3911.2.S1_s_atCA604151--4e+0At2g44290protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3)O.I.H.G.S.X.
0.056.70.94TaAffx.15685.1.A1_atCD492179--9e-2At4g01900GLB1 (GLNB1 HOMOLOG)O.I.H.G.S.X.
0.045.80.93Ta.5409.2.S1_x_atCA657627--4e+0At5g40710zinc finger (C2H2 type) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.299.3GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
9.099.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.598.6GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
5.397.6GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.297.5GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.097.4GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.697.0GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.697.0GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.196.4GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.996.1GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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