Co-expression analysis

Gene ID	TaAffx.112772.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g18280: glycine-rich cell wall protein-related (HF=2e+1)
Module size	29 genes
NF	0.47
%ile	72.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.92	98.5	0.93	TaAffx.112772.1.S1_at	CA621091	-	-	2e+1	At4g18280	glycine-rich cell wall protein-related	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.94	TaAffx.38217.1.S1_at	BJ244494	-	-	7e+0	At5g11690	ATTIM17-3	O.I.	H.G.	S.X.	Please select
0.58	79.2	0.96	TaAffx.51594.1.S1_at	CA723204	-	-	1e+0	At3g51810	EM1 (LATE EMBRYOGENESIS ABUNDANT 1)	O.I.	H.G.	S.X.	Please select
0.58	79.2	0.94	TaAffx.64156.1.S1_at	BJ313261	-	-	4e+0	At5g19830	aminoacyl-tRNA hydrolase	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.94	TaAffx.107754.1.S1_at	CD876350	-	-	1e+0	At2g21780	unknown protein	O.I.	H.G.	S.X.	Please select
0.52	73.7	0.95	Ta.30411.1.S1_at	CK209297	-	-	5e+0	At5g62280	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.95	Ta.18019.2.S1_at	CA625748	-	-	1e+0	At1g32700	zinc-binding family protein	O.I.	H.G.	S.X.	Please select
0.49	69.7	0.95	Ta.6759.2.S1_at	BJ211299	-	-	2e+0	At5g63310	NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)	O.I.	H.G.	S.X.	Please select
0.49	69.7	0.96	TaAffx.73323.1.S1_at	CA713945	-	-	3e+0	At5g45870	Bet v I allergen family protein	O.I.	H.G.	S.X.	Please select
0.48	69.0	0.94	TaAffx.38815.1.A1_at	BJ216899	-	-	1e+0	At5g24170	-	O.I.	H.G.	S.X.	Please select
0.48	69.0	0.94	TaAffx.66060.1.S1_at	BJ209984	-	-	7e-2	At3g52550	-	O.I.	H.G.	S.X.	Please select
0.48	69.0	0.95	TaAffx.6157.1.S1_at	CA690748	-	-	4e+0	At2g42930	glycosyl hydrolase family protein 17	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.95	Ta.6762.3.S1_at	BJ246546	-	-	1e+0	At5g61490	-	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.94	TaAffx.24685.1.S1_at	CA714323	-	-	3e+0	At2g36080	DNA-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.95	TaAffx.118620.1.S1_at	BJ316617	-	-	1e+0	At2g31560	unknown protein	O.I.	H.G.	S.X.	Please select
0.45	65.2	0.94	TaAffx.77881.1.S1_at	CA741326	-	-	2e+1	Atcg00065	-	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.94	TaAffx.78517.1.S1_at	CA731451	-	-	4e+0	At2g25720	unknown protein	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.93	TaAffx.57764.1.S1_at	CA625262	-	-	4e+0	At1g27950	LTPG1 (GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 1)	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.94	TaAffx.107179.1.S1_at	CA704854	-	-	8e-1	At3g60760	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	60.9	0.95	TaAffx.85941.1.S1_at	CA618291	-	-	2e+1	At5g23760	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please select
0.39	56.1	0.94	Ta.5523.2.S1_a_at	BJ243328	-	-	4e+0	At5g47600	heat shock protein-related	O.I.	H.G.	S.X.	Please select
0.39	56.1	0.94	Ta.2167.3.S1_a_at	CA647226	-	-	3e-13	At3g06050	PRXIIF (PEROXIREDOXIN IIF)	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.95	TaAffx.105451.1.S1_at	CA734135	-	-	1e+0	At3g06730	thioredoxin family protein	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.95	TaAffx.4857.1.S1_at	CA730111	-	-	4e+0	At1g77682	-	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.94	Ta.6759.2.S1_x_at	BJ211299	-	-	2e+0	At5g63310	NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)	O.I.	H.G.	S.X.	Please select
0.34	48.1	0.95	TaAffx.79437.1.S1_at	CA715704	-	-	3e+0	At1g02680	TAF13 (TBP-ASSOCIATED FACTOR 13)	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.95	TaAffx.90026.1.S1_at	BQ609544	-	-	3e-1	At3g20830	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.28	39.2	0.95	Ta.21581.1.S1_at	CA696527	-	-	4e+0	At2g36460	fructose-bisphosphate aldolase, putative	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.94	TaAffx.110697.1.S1_at	CA679731	-	-	4e+0	At1g47450	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.9	98.7	GSM324487	Si- B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
7.9	98.7	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.2	98.5	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.7	98.4	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.6	98.3	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.3	98.2	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.9	97.3	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
4.3	96.7	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.0	96.3	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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