Co-expression analysis

Gene ID	TaAffx.112283.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g66370: unknown protein (HF=6e+0)
Module size	6 genes
NF	0.01
%ile	3.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.71	TaAffx.112283.1.S1_at	CA622230	-	-	6e+0	At5g66370	unknown protein	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.88	TaAffx.30851.1.S1_at	CA621583	-	-	4e+0	At5g19050	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.93	Ta.12647.3.S1_x_at	CA654695	-	-	1e+0	At2g33220	-	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.91	Ta.3083.2.A1_at	BJ254365	-	-	4e+0	At3g05602	unknown protein	O.I.	H.G.	S.X.	Please select
-	0.7	0.90	Ta.11844.1.A1_at	BQ170915	-	-	5e+0	At5g46230	unknown protein	O.I.	H.G.	S.X.	Please select
-	0.7	0.91	Ta.12789.2.A1_x_at	CK211356	-	-	5e-9	At1g77710	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.9	99.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.7	97.9	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.2	97.5	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.1	97.5	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.1	97.5	GSM298068	Leaf tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.6	97.0	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.6	97.0	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.9	96.1	GSM138203	genotype F44 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.8	96.0	GSM111224	genotype A81 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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