Co-expression analysis

Gene ID TaAffx.112188.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g38092: unknown protein (HF=2e+1)
Module size 6 genes
NF 0.79
%ile 96.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8092.20.92TaAffx.112188.1.S1_atCA625505--2e+1At4g38092unknown proteinO.I.H.G.S.X.
0.7790.80.89Ta.3320.1.S1_atBJ306579--3e-3At5g14680universal stress protein (USP) family proteinO.I.H.G.S.X.
0.7790.80.91TaAffx.108984.1.S1_atCA681537--4e+0At4g35070-O.I.H.G.S.X.
0.6786.30.90TaAffx.32412.1.S1_atCA595509--1e-3At3g47870LBD27 (LOB DOMAIN-CONTAINING PROTEIN 27)O.I.H.G.S.X.
0.6786.30.92Ta.10440.2.S1_atBJ247141--1e+0At5g10780-O.I.H.G.S.X.
0.6081.00.93TaAffx.58364.1.S1_atCA620231--2e+1At4g10610CID12O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
39.599.9GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
6.498.2GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.797.9GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.297.5GSM139930Anther immature pollen rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.197.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.997.3GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.396.7GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.795.8GSM139926Anther tetrads rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.595.4GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.495.2GSM314268tissue type: seedling, leaf - rep3GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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