Co-expression analysis

Gene ID TaAffx.110054.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g40745: unknown protein (HF=1e+0)
Module size 16 genes
NF 0.31
%ile 50.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9498.90.90TaAffx.110054.1.S1_atCA664703--1e+0At2g40745unknown proteinO.I.H.G.S.X.
0.5779.20.93TaAffx.83041.1.S1_x_atCA662778--4e+0At3g53270unknown proteinO.I.H.G.S.X.
0.5173.00.93Ta.6579.2.S1_atBJ245075--4e-9At2g38970zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3854.70.94TaAffx.110302.1.S1_atCA660681--9e-1At2g41150unknown proteinO.I.H.G.S.X.
0.3753.00.94TaAffx.124121.1.S1_atCA713272--1e+1At4g03060AOP2 (ALKENYL HYDROXALKYL PRODUCING 2)O.I.H.G.S.X.
0.3753.00.92TaAffx.110110.1.S1_atCA663803--3e+0At3g49845-O.I.H.G.S.X.
0.3346.90.94TaAffx.26872.1.S1_atCA683807--2e-2At3g10740ASD1 (ALPHA-L-ARABINOFURANOSIDASE 1)O.I.H.G.S.X.
0.2735.60.92TaAffx.56260.1.S1_atCA655082--4e+0At3g62630-O.I.H.G.S.X.
0.2430.30.93Ta.4479.3.S1_atCA655446--4e-4At3g04800ATTIM23-3O.I.H.G.S.X.
0.2227.10.95TaAffx.107715.1.S1_atCA696471--2e-2At1g75550glycine-rich proteinO.I.H.G.S.X.
0.2125.50.95TaAffx.103414.1.S1_atCA665233--7e+0At5g10160beta-hydroxyacyl-ACP dehydratase, putativeO.I.H.G.S.X.
0.2024.00.94TaAffx.53879.1.S1_atCA688160--9e-1At5g45090AtPP2-A7 (Phloem protein 2-A7)O.I.H.G.S.X.
0.2024.00.96Ta.365.2.S1_atBJ245006--5e-1At2g46580pyridoxine 5'-phosphate oxidase-relatedO.I.H.G.S.X.
0.1821.00.94TaAffx.110125.1.S1_atCA663551--3e+0At1g21620APUM20 (Arabidopsis Pumilio 20)O.I.H.G.S.X.
0.1821.00.93TaAffx.109332.1.S1_x_atCA676976--5e-2At5g53180PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2)O.I.H.G.S.X.
0.1314.60.94TaAffx.120201.1.S1_atBJ236815--2e+1At5g66180-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.599.7GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
14.199.5GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
5.797.9GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.297.5GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.997.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.897.2GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.996.1GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.896.0GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.896.0GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.695.6GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage