Co-expression analysis

Gene ID	TaAffx.109255.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g64810: WRKY51 (HF=1e+1)
Module size	6 genes
NF	0.04
%ile	12.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.73	TaAffx.109255.1.S1_at	CA677969	-	-	1e+1	At5g64810	WRKY51	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.94	Ta.28728.3.S1_at	BJ284035	Plasma membrane intrinsic protein	-	3e-31	At2g37180	RD28 (RESPONSIVE TO DESICCATION 28)	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.94	Ta.28728.3.S1_x_at	BJ284035	Plasma membrane intrinsic protein	-	3e-31	At2g37180	RD28 (RESPONSIVE TO DESICCATION 28)	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.94	Ta.8457.2.A1_at	BQ161925	-	-	1e+1	At4g00220	JLO (JAGGED LATERAL ORGANS)	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.93	TaAffx.122452.1.A1_at	BE515764	-	-	4e+0	At1g68880	AtbZIP (Arabidopsis thaliana basic leucine-zipper 8)	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.83	TaAffx.105253.1.S1_at	CA737190	-	-	4e+0	At4g10430	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.3	99.2	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.7	98.9	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.4	98.6	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.2	98.1	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5	96.9	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5	96.9	GSM250910	TcLr1_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM250914	Tc_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM250886	TcLr1_3dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.2	96.6	GSM250890	Tc_3dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM250901	Tc_7dpi_mock_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

A co-expression module including the maize gene, ZmAffx.1079.1.A1_at, orthologous to the query gene, TaAffx.109255.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	ZmAffx.1079.1.A1_at	At5g64810	hypothetical protein LOC100273248	-	7e-1	At3g01020	ISU2 (ISCU-LIKE 2)	O.I.	H.G.	S.X.	Please select
0.40	48.5	Zm.18389.1.S1_at	At5g64810	-	-	8e-34	At1g02410	cytochrome c oxidase assembly protein CtaG / Cox11 family	O.I.	H.G.	S.X.	Please select
0.40	48.5	Zm.12794.1.A1_at	At5g64810	protein kinase domain containing protein	-	8e-3	At5g53450	ORG1 (OBP3-responsive gene 1)	O.I.	H.G.	S.X.	Please select
0.20	14.2	Zm.12716.2.A1_at	At5g64810	-	-	3e+0	At1g12630	DNA binding / transcription activator/ transcription factor	O.I.	H.G.	S.X.	Please select
0.10	4.6	Zm.5959.1.A1_at	At5g64810	-	-	1e-6	At4g30720	electron carrier/ oxidoreductase	O.I.	H.G.	S.X.	Please select
0.04	1.5	Zm.618.1.S1_at	At5g64810	tonoplast membrane integral protein ZmTIP4-2	-	1e-2	At2g25810	TIP4	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

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