Co-expression analysis

Gene ID	TaAffx.109255.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g64810: WRKY51 (HF=1e+1)
Module size	6 genes
NF	0.04
%ile	12.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.73	TaAffx.109255.1.S1_at	CA677969	-	-	1e+1	At5g64810	WRKY51	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.94	Ta.28728.3.S1_at	BJ284035	Plasma membrane intrinsic protein	-	3e-31	At2g37180	RD28 (RESPONSIVE TO DESICCATION 28)	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.94	Ta.28728.3.S1_x_at	BJ284035	Plasma membrane intrinsic protein	-	3e-31	At2g37180	RD28 (RESPONSIVE TO DESICCATION 28)	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.94	Ta.8457.2.A1_at	BQ161925	-	-	1e+1	At4g00220	JLO (JAGGED LATERAL ORGANS)	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.93	TaAffx.122452.1.A1_at	BE515764	-	-	4e+0	At1g68880	AtbZIP (Arabidopsis thaliana basic leucine-zipper 8)	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.83	TaAffx.105253.1.S1_at	CA737190	-	-	4e+0	At4g10430	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.3	99.2	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.7	98.9	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.4	98.6	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.2	98.1	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5	96.9	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5	96.9	GSM250910	TcLr1_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM250914	Tc_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM250886	TcLr1_3dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.2	96.6	GSM250890	Tc_3dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM250901	Tc_7dpi_mock_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

A co-expression module including the soybean gene, Gma.2764.2.S1_at, orthologous to the query gene, TaAffx.109255.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.86	93.0	Gma.2764.2.S1_at	At5g64810	MYB transcription factor MYB122	-	6e-17	At1g22640	MYB3 (MYB DOMAIN PROTEIN 3)	O.I.	H.G.	S.X.	Please select
0.82	91.9	GmaAffx.12726.1.A1_at	At5g64810	-	-	3e+0	At5g65940	CHY1 (BETA-HYDROXYISOBUTYRYL-COA HYDROLASE 1)	O.I.	H.G.	S.X.	Please select
0.80	91.5	GmaAffx.33497.1.S1_at	At5g64810	-	-	4e+0	At5g27210	-	O.I.	H.G.	S.X.	Please select
0.73	88.9	GmaAffx.3696.1.S1_at	At5g64810	-	-	2e+0	At5g17470	calmodulin-related protein, putative	O.I.	H.G.	S.X.	Please select
0.73	88.9	Gma.4530.1.A1_s_at	At5g64810	-	-	9e-1	At5g59380	MBD6	O.I.	H.G.	S.X.	Please select
0.70	87.1	GmaAffx.61790.1.S1_at	At5g64810	-	-	1e-3	At3g52450	PUB22 (PLANT U-BOX 22)	O.I.	H.G.	S.X.	Please select
0.70	87.1	Gma.1470.1.S1_at	At5g64810	syringolide-induced protein 14-1-1	-	1e-2	At1g20310	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.1	GmaAffx.75438.1.S1_at	At5g64810	-	-	5e-1	At1g18750	AGL65 (AGAMOUS-LIKE 65)	O.I.	H.G.	S.X.	Please select
0.67	86.1	GmaAffx.57085.1.S1_at	At5g64810	-	-	2e-2	At2g20120	COV1 (CONTINUOUS VASCULAR RING)	O.I.	H.G.	S.X.	Please select
0.66	84.0	GmaAffx.78315.1.S1_at	At5g64810	dehydration-responsive element binding protein 3	-	4e-10	At1g19210	AP2 domain-containing transcription factor, putative	O.I.	H.G.	S.X.	Please select
0.61	81.8	GmaAffx.20926.1.S1_at	At5g64810	-	-	8e-1	At3g22560	GCN5-related N-acetyltransferase (GNAT) family protein	O.I.	H.G.	S.X.	Please select
0.58	78.8	GmaAffx.90952.1.S1_at	At5g64810	-	-	1e+0	At5g59380	MBD6	O.I.	H.G.	S.X.	Please select
0.58	78.8	Gma.17736.1.S1_at	At5g64810	-	-	9e-2	At2g45120	zinc finger (C2H2 type) family protein	O.I.	H.G.	S.X.	Please select
0.56	78.2	GmaAffx.11259.1.S1_at	At5g64810	-	-	8e+0	Atmg01170	-	O.I.	H.G.	S.X.	Please select
0.55	76.3	GmaAffx.72063.1.S1_at	At5g64810	-	-	7e-5	At4g29780	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	76.3	Gma.6948.1.S1_at	At5g64810	-	-	3e-2	At2g27260	-	O.I.	H.G.	S.X.	Please select
0.52	73.1	GmaAffx.87213.1.S1_at	At5g64810	-	-	2e-1	At5g57880	unknown protein	O.I.	H.G.	S.X.	Please select
0.51	72.3	Gma.12031.2.S1_at	At5g64810	-	-	3e-2	At1g56060	unknown protein	O.I.	H.G.	S.X.	Please select
0.51	72.3	GmaAffx.92757.1.S1_s_at	At5g64810	-	-	2e-2	At1g56060	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	GmaAffx.85640.1.S1_at	At5g64810	-	-	1e+0	At5g57290	60S acidic ribosomal protein P3 (RPP3B)	O.I.	H.G.	S.X.	Please select
0.49	68.3	GmaAffx.38825.1.A1_at	At5g64810	-	-	8e-1	At5g27541		O.I.	H.G.	S.X.	Please select
0.49	68.3	Gma.1157.1.S1_at	At5g64810	-	-	7e-3	At3g03280	unknown protein	O.I.	H.G.	S.X.	Please select
0.49	68.3	Gma.789.1.S1_at	At5g64810	-	-	6e-4	At3g21310	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	66.6	GmaAffx.50381.2.S1_s_at	At5g64810	-	-	2e-8	At1g14860	atnudt18 (Arabidopsis thaliana Nudix hydrolase homolog 18)	O.I.	H.G.	S.X.	Please select
0.46	65.5	Gma.12031.2.S1_x_at	At5g64810	-	-	3e-2	At1g56060	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	65.5	GmaAffx.70006.2.A1_at	At5g64810	-	-	3e+0	At4g24026	unknown protein	O.I.	H.G.	S.X.	Please select
0.43	60.6	GmaAffx.50381.1.S1_at	At5g64810	-	-	2e-11	At1g14860	atnudt18 (Arabidopsis thaliana Nudix hydrolase homolog 18)	O.I.	H.G.	S.X.	Please select
0.31	42.2	Gma.1256.1.S1_at	At5g64810	WRKY46 protein	-	3e-1	At4g10280	-	O.I.	H.G.	S.X.	Please select
0.28	39.0	Gma.1805.1.S1_at	At5g64810	-	-	1e-3	At2g20562	unknown protein	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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