Co-expression analysis

Gene ID	TaAffx.10868.1.A1_at
Gene name	MIKC-type MADS-box transcription factor WM24B
Homology with Arabidopsis	Similar to At2g01200: IAA32 (INDOLE-3-ACETIC ACID INDUCIBLE 32) (HF=4e+0)
Module size	6 genes
NF	0.52
%ile	78.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	82.0	0.85	TaAffx.10868.1.A1_at	BJ230548	MIKC-type MADS-box transcription factor WM24B	-	4e+0	At2g01200	IAA32 (INDOLE-3-ACETIC ACID INDUCIBLE 32)	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.85	TaAffx.31704.1.S1_at	CA609595	-	-	7e-1	At5g04830	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.86	Ta.30801.1.S1_s_at	CA616563	-	-	1e+0	At2g45420	LBD18 (LOB DOMAIN-CONTAINING PROTEIN 18)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.88	TaAffx.70677.1.S1_at	CA701525	-	-	1e+0	At4g31280	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	60.9	0.88	Ta.30399.1.A1_at	CK199497	-	-	6e+0	At5g29050	unknown protein	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.86	TaAffx.83768.1.S1_at	CA651516	-	-	5e-1	At5g60340	maoC-like dehydratase domain-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
17.2	99.6	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
8.4	98.9	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
5.6	97.8	GSM314288	tissue type: 22 DAP endosperm - rep2	GSE12508	Transcription patterns during wheat development
4.7	97.1	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
4.2	96.6	GSM298085	Crown tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM314264	tissue type: seedling, crown - rep2	GSE12508	Transcription patterns during wheat development
3.8	96.0	GSM138162	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.5	95.4	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM298088	Crown tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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