Co-expression analysis

Gene ID TaAffx.108631.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g15000: 60S ribosomal protein L27 (RPL27C) (HF=3e-1)
Module size 11 genes
NF 0.27
%ile 44.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.99TaAffx.108631.1.S1_atCA686048--3e-1At4g1500060S ribosomal protein L27 (RPL27C)O.I.H.G.S.X.
0.5374.90.99Ta.27492.1.S1_atBT009358.1--2e+0At5g53592-O.I.H.G.S.X.
0.4767.90.99TaAffx.107929.1.S1_atCA688016--1e+0At1g48630RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B)O.I.H.G.S.X.
0.4666.81.00TaAffx.108661.1.S1_atCA685694--2e-11At3g2339060S ribosomal protein L36a/L44 (RPL36aA)O.I.H.G.S.X.
0.4058.41.00TaAffx.107944.1.S1_s_atCA693029--1e+1At5g64650ribosomal protein L17 family proteinO.I.H.G.S.X.
0.3854.71.00TaAffx.81322.1.S1_atCA687527--9e-1At5g54070AT-HSFA9O.I.H.G.S.X.
0.3854.71.00TaAffx.108373.1.S1_atCA689084--4e+0At5g62020AT-HSFB2AO.I.H.G.S.X.
0.1922.41.00TaAffx.26521.1.S1_atCA688013--1e-2At1g75630AVA-P4O.I.H.G.S.X.
0.1821.01.00TaAffx.26656.1.S1_atCA686646--7e-2At1g18080ATARCAO.I.H.G.S.X.
0.1517.10.99TaAffx.81634.1.S1_atCA683648--1e+0At1g15120ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putativeO.I.H.G.S.X.
0.1314.60.99TaAffx.81408.1.S1_atCA687570--8e-2At5g53300UBC10 (ubiquitin-conjugating enzyme 10)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
69.2100.0GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
54.699.9GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
7.898.7GSM324489Si- B+ rep3GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
4.797.1GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.896.0GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.695.6GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.595.4GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.294.8GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.294.8GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.194.5GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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