Co-expression analysis

Gene ID TaAffx.108531.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g49960: peroxidase, putative (HF=2e-4)
Module size 6 genes
NF 0.03
%ile 10.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.10.80TaAffx.108531.2.S1_atCA682554--2e-4At3g49960peroxidase, putativeO.I.H.G.S.X.
0.0910.40.85TaAffx.7266.1.S1_atCA663550--9e-1At5g62840phosphoglycerate/bisphosphoglycerate mutase family proteinO.I.H.G.S.X.
0.067.60.85TaAffx.108096.1.S1_atCA659463--4e+0At2g18010auxin-responsive family proteinO.I.H.G.S.X.
0.023.60.84TaAffx.53146.1.S1_atCA696077--3e-1At3g17890unknown proteinO.I.H.G.S.X.
0.023.60.84TaAffx.53644.1.S1_atCA690428--7e-1At5g52220-O.I.H.G.S.X.
0.023.60.86TaAffx.108170.4.S1_atCA689645--2e+1At3g17609HYH (HY5-HOMOLOG)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
30.699.9GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
19.399.7GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
14.899.5GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
14.099.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.698.7GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.498.6GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.498.2GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.397.6GSM246386SB169_Stem_ rep1_at anthesisGSE9767Genotypic differences in water soluble carbohydrate metabolism in stemLink to GEO
5.297.5GSM298066Leaf tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.297.5GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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